Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03371 ATGCAGCGTCAAAGCCACATTTGGATAGCAATTTTGCTAACATCGATAACCATCCTATTCTACTCGACATTAGCTAGAGCTCTTGAAGAACCTGAGTACGGGTACGATGAAAAGAGTGCGAGGGGACCTCAGCACTGGGGTGATCTCAAAAAAGAATGGGCAATATGTAAAAATGGAAAAATGCAATCTCCTATTGATCTGTCCAGCGACAGAGTGAAAGTGATGCCCAAGTTAGGGGAGCTAAAGAGGAGCTACAAGCCTCAACATGCCACTGTCTCCAACAGGGGCCATGATGTTGCGGTCACCTGGGAAGGGGATGCTGGCTCAATAGATATCAATGGAACACATTTCTTCCTCCAACAAAGCCATTGGCACTGGCCTTCCGAACATACCATCAACGGCCGCAGGTACGACTTGGAGCTACACATGGTTCATGTTAGTCCACAGCCAGATGGAAAAAACAAGACTGCTGTTATTGCTCTTTTGTATAAGTATGGTTCACCCGATCCATTTCTCTCTAAGTTGGGGAAATACATAAAGGACATTCCTGCTGAGGAAGAAGAGAAAAGCATTGGGGTGATTGATCCCTCAGAAATTAAGATGGGTGGCAAGATGTACTACAGATACATGGGATCACTCACTGCACCTCCTTGCACTGAAGGTGTTATTTGGACAATTAATAAGAAGATAAGAACTGTTTCGAGGGGGCAAGTGAAGCTACTCAAGAATTCCGTACTTAAATATTATAAAAAAAGGAATGCAAGGCCGGTGCAGCCCCTTAATCAGCGAGAGATACAGCTCTACTACCCAAAGGCAAAGAATATACCTCTGTATTAA 837 0.4432 MQRQSHIWIAILLTSITILFYSTLARALEEPEYGYDEKSARGPQHWGDLKKEWAICKNGKMQSPIDLSSDRVKVMPKLGELKRSYKPQHATVSNRGHDVAVTWEGDAGSIDINGTHFFLQQSHWHWPSEHTINGRRYDLELHMVHVSPQPDGKNKTAVIALLYKYGSPDPFLSKLGKYIKDIPAEEEEKSIGVIDPSEIKMGGKMYYRYMGSLTAPPCTEGVIWTINKKIRTVSRGQVKLLKNSVLKYYKKRNARPVQPLNQREIQLYYPKAKNIPLY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03371 278 SMART Carb_anhydrase_2a 33 269 IPR001148 -
Rops8g03371 278 SUPERFAMILY Carbonic anhydrase 32 265 IPR036398 -
Rops8g03371 278 ProSitePatterns Alpha-carbonic anhydrases signature. 128 144 IPR018338 GO:0004089|GO:0008270
Rops8g03371 278 PANTHER CARBONIC ANHYDRASE 31 263 IPR023561 GO:0004089|GO:0008270
Rops8g03371 278 Pfam Eukaryotic-type carbonic anhydrase 42 267 IPR001148 -
Rops8g03371 278 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 269 IPR001148 -
Rops8g03371 278 CDD alpha_CA_prokaryotic_like 42 267 IPR041891 -
Rops8g03371 278 Gene3D Alpha carbonic anhydrase 30 275 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03371 Rops-Chr8 72569663 72573655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03371 K01674 - gmx:100799362 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03371 8 72569663 72573655 Rops6g00981 6 23679129 23683952 PCT
Rops6g00980 6 23659398 23673917 Rops8g03371 8 72569663 72573655 PCT