Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00981 ATGAAGCACCAAAGCAGACTCAAGATGTACCTACCCAGTTTGCTAATACTAGTTACCATCCTAGTCCATTCAACAATATGGACAGTAGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGCGAAAAGGGTCCCTCACACTGGGGCGATCTCAAGAAGGAATGGGCAGCTTGTAAAAATGGCAAAATGCAATCTCCCATTGATCTATCAAGCCATAGAGTGAGAGTGGTACAAGAGTTAGGGGAGCTAAAGAAGTATTATAAGCCTCAGAATGCCACTGTCAAGAACAGAGGCCACGATATTGAGCTGAAATGGGAGGGAGATGCTGGATCAATAGTCATCAATGGCACCCAGTTTTTTCTGCAACAATGCCACTGGCACTCACCTTCCGAACATACCATCAATGGCAGAAGGTATGAATTGGAGCTCCACATGGTTCATGAAAGTCGAAACTCAAACGGGGAGAACAAGACCGCTGTTGTGGGACTATTGTATAAAATTGGTAGGCCGGATCCTGTCCTCAGCAAGTTGTCAAAATACATAAAATCCATGATAGATGATGAAGCAGAAAGGAACATTGGTGTTTTTGATCCCTCAGAAATCAAGCTGGGTGGCAAGAAGTACTACAGATACATGGGCTCCCTCACTGTCCCTCCTTGCACTGAAGGTGTCATTTGGACCATGAACAAGAAGATAAGAAGTGTGTCAAAGGCGCAAATCAATTTACTAAGAGAGGCTGTCCACGATCATGCGGAGAAGAATGCCAGACCTGTACAACCCCTGAATCGACGAGGGATACAACTCTATGGCCCAAAACGGAAGGAATAA 840 0.4476 MKHQSRLKMYLPSLLILVTILVHSTIWTVAQEVEDESEFDYIKGSEKGPSHWGDLKKEWAACKNGKMQSPIDLSSHRVRVVQELGELKKYYKPQNATVKNRGHDIELKWEGDAGSIVINGTQFFLQQCHWHSPSEHTINGRRYELELHMVHESRNSNGENKTAVVGLLYKIGRPDPVLSKLSKYIKSMIDDEAERNIGVFDPSEIKLGGKKYYRYMGSLTVPPCTEGVIWTMNKKIRSVSKAQINLLREAVHDHAEKNARPVQPLNRRGIQLYGPKRKE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00981 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Rops6g00981 279 MobiDBLite consensus disorder prediction 255 279 - -
Rops6g00981 279 Gene3D Alpha carbonic anhydrase 35 278 IPR036398 -
Rops6g00981 279 FunFam Alpha carbonic anhydrase 3 36 277 - -
Rops6g00981 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Rops6g00981 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Rops6g00981 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Rops6g00981 279 PANTHER CARBONIC ANHYDRASE 36 268 IPR023561 GO:0004089|GO:0008270
Rops6g00981 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Rops6g00981 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00981 Rops-Chr6 23679129 23683952 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00981 K01674 - gmx:100797935 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03371 8 72569663 72573655 Rops6g00981 6 23679129 23683952 PCT