Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02035 ATGTCATCCATCATAAATGGCTGTGTTTCAATGTCCAACAATACCTTCTTTGCTCACCTCATTCTGGTTGTTTTGTGGCTGATCAACATAGGAGCTAGCCACCAAACTATGTTCACTCAAATCCTTATCTTCTTCCTCTTCTTCACTCCCTCTATATCTGTCACTGCACAAGAAGAAAGTGATGATTTCGTGCGTCCATTAGACCTCAAAATGATGGGTTTGGACAAGAAAGAGAAACTGAGCCATTTCAAGTTCTATTGGCATGACATAGTGAGTGGACGCAACCCCTCTTCTATGGCAGTTGTTCCACCACCCTCGAAGAACTCAACCACAGCCTTTGGTTTGGTGAACATGATTGAGAACCCTTTGACACTGGGACCCCAATTGAGCTCCAAATTGGTGGGAAAAGCTCAAGGGTTCTATGCCTCCACATCACAGAGTGAGGTTGACTTGCTCATGGCTATGAACTTTGCCATCACTGAAGGTAAGTACAATGGTAGCACCATCACAATTTTGGGGAGGAACCCTGTTTTCAACAAGGTTAGGGAGATGCCTGTGATTGGTGGCAGTGGTCTCTTTAGATTTGCTAGAGGCTATGCTCAACTTAGAACTTATTGGTTCTCACCCCAGACAAAGGATGCTATAGTGGAGTACAATATTTATGTTTTGCATTATTGA 678 0.4351 MSSIINGCVSMSNNTFFAHLILVVLWLINIGASHQTMFTQILIFFLFFTPSISVTAQEESDDFVRPLDLKMMGLDKKEKLSHFKFYWHDIVSGRNPSSMAVVPPPSKNSTTAFGLVNMIENPLTLGPQLSSKLVGKAQGFYASTSQSEVDLLMAMNFAITEGKYNGSTITILGRNPVFNKVREMPVIGGSGLFRFARGYAQLRTYWFSPQTKDAIVEYNIYVLHY* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02035 225 Gene3D - 67 222 IPR044859 -
Rops8g02035 225 PANTHER NUCLEOPORIN-RELATED 69 221 IPR004265 -
Rops8g02035 225 Pfam Dirigent-like protein 81 222 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02035 Rops-Chr8 47654072 47654749 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02035 - - gmx:100796078 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02035 8 47654072 47654749 Rops4g01079 4 29182809 29183613 PCT
Rops4g01081 4 29205855 29206448 Rops8g02035 8 47654072 47654749 PCT