Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01081 ATGCCTACCCTTCATTTCCTGACCTTCTTGTTCTTCCTTCTCCTCTCTTGCCATGCCCTCATCACTTCTTCTGTCACTACAGAAGAAGACACCACTGATTTTGTGCGTCCAATAGACCGCAAGTTATTAGGCCTAAAGAAGAAAGAAAAGTTGAGCCATTTCAGGTTCTATTGGCATGACATAGTGAGTGGACACAACGCCACTTCAGTTGCTGTTGTTCCACCACCACTCAAGTTGAACTCCACCACTGCCTTTGGTTTGGTCAACATGATTGATAACCCTTTAACCTTGGGACCCCAATTGAGTTCCAAGCTTGTGGGAAAGGCTCAGGGGTTCTATGCATCTGCATCACAGAGTGAGGTTGATTTGCTTATGGCTATGAACTTTGCCTTCATTGATGGGAAGTATAATGGTAGCACCATCACTATATTGGGAAGGAACTGTGTTTTCCATAAGGTGAGGGAGATGCCTGTGATTGGTGGTAGTGGCCTTTTCAGGTTTGCTAGGGGTTATGCAGAAGCTAAAACTAATTGGGTTGATCTCAAATCTGGGGATGCTATAGTTGAGTATAATGTTTATGTTTTCCATTATTGA 594 0.436 MPTLHFLTFLFFLLLSCHALITSSVTTEEDTTDFVRPIDRKLLGLKKKEKLSHFRFYWHDIVSGHNATSVAVVPPPLKLNSTTAFGLVNMIDNPLTLGPQLSSKLVGKAQGFYASASQSEVDLLMAMNFAFIDGKYNGSTITILGRNCVFHKVREMPVIGGSGLFRFARGYAEAKTNWVDLKSGDAIVEYNVYVFHY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01081 197 PANTHER NUCLEOPORIN-RELATED 39 193 IPR004265 -
Rops4g01081 197 Gene3D - 41 190 IPR044859 -
Rops4g01081 197 Pfam Dirigent-like protein 52 195 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01081 Rops-Chr4 29205855 29206448 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01081 - - gmx:100808529 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01081 4 29205855 29206448 Rops8g02035 8 47654072 47654749 PCT