Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01079 ATGACCACCCAATTCCTCATCTTCTCCCTTCTTCTCCTCTCATGCTACATCATCACCGCAGAAGACACCGGTTTCGTGCGCTCACTAGACCCTGAATTACTCGAAAAGAAAGAAAATGTAAGCCAGTTCAGGTTCTATTGGCAAGACATAGTGGGTGGAAAAAACGCCACCTCAATTCCAATCAGTCAGTCACTCCCAAAGTACGAGTCAACAAGTTCCTTTGGTTTGGTGAGAATCATAGACAACGCTTTAACCTTAGGACCCCAACTTAGCTCAAAGCTTGTGGGAAGGGCTCAAGGGTTCTATGCCTCTGCATCACAAACCGAGCTTGATTTTCTTATGGTTATGAACTTTGTCTTGTTTGAAGGGAAGTATAATGGGAGCACCATCACTATCTTGGGTAGGAATGTTGCTAACAATAAGGTGAGAGAGATGCCTGTGATTGGTGGAAGTGGGCTTTTTAGGTTTGCTAAGGGTTATGCTGAGGCTAGTACTATCTCTTTTGATCCTAAATCTGGGGATACTACTGTTGAGTACAACGTTTATGTCTCCCATTATTGA 561 0.4367 MTTQFLIFSLLLLSCYIITAEDTGFVRSLDPELLEKKENVSQFRFYWQDIVGGKNATSIPISQSLPKYESTSSFGLVRIIDNALTLGPQLSSKLVGRAQGFYASASQTELDFLMVMNFVLFEGKYNGSTITILGRNVANNKVREMPVIGGSGLFRFAKGYAEASTISFDPKSGDTTVEYNVYVSHY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01079 186 PANTHER NUCLEOPORIN-RELATED 31 182 IPR004265 -
Rops4g01079 186 Gene3D - 29 182 IPR044859 -
Rops4g01079 186 Pfam Dirigent-like protein 41 183 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01079 Rops-Chr4 29182809 29183613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01079 - - mtr:11413046 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02035 8 47654072 47654749 Rops4g01079 4 29182809 29183613 PCT