Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02712 ATGGCACTGGCTTCTGTTCCAAAAGTAATCTTTGGTTTAATTGCATTTGGAATATTCTGGATATTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCTATTGGAAGAACTGCAGGGTCCCTTTTAGGTGCCATGCTTATGGTCCTATTCCGAGTTATCACTCCTGATGAGGCTTATGCCACAATTGATCTCCAAATTCTTGGTCTTCTTTTTGGGACAATGGTTATCAGTGTTTATCTTGAAAGAGCAGACATGTTTAAATACATAGGGAAGTTGCTCTCTTGGAAAAGTAGAGGACCAAAGGACTTAATTTGTAGAATCTGTCTTATTTCTGCTGTATCAAGTGCTCTTTTCACAAATGACACTTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAGACAGCATAACCTCTCACCAACTCCTTTCCTAGTTGCCCTTGCTTCAAGTGCTAATATTGGTTCCTCAGCAACTCCAATTGGCAACCCTCAAAACTTGGTTATTGCTGTTCTGAGTAAAATATCATTTGGAAGTTTCCTAATTGGTATTCTTCCAGCTATGCTAGCTGGAGTTGTAGTGAATGCTTTAATTCTTCTAACCATGTATTGGAGGTTATTAGGTATTCATAAGGATGAAGAAGATGCAGTTGCTGAAGCTGTAGCAGAAGAGGAGTTTGATTCCCATCGGTTTTCTCCGGCCACAATGTCTCATGTCACATCCTTAAATTCTCAAGAATGGAATTCCCATCTTGAATCTATAAATATTCAAAACTCCCCTCAAGTTCAAATTCTAAGAAACCGAGCTAGTGCAAATGAAATTGAAATTCATGGAGTCCCTAGCAGTACATTTGATTCTGCAAGAAACTCAAATGTATCACTGGAGGGGATAAATCGTGTGCCATCTCCATCTCCTACTAGGGAGGAAACTAGCTTTACAAACACTTCTGCAGCAGCAGATACAGAAAGTGATACTCATACTATGCACTCTTCAGAAAGAAAAAGCATTTCAATCATAAAATGGAAAAGGGTACTATGGAAAACTTGTGTTTACTCCATCACATTAGGAATGTTGGTTGCTTTACTTCTAGGTTTAAATATGTCATGGACTGCAATTACTGCTGCACTTGCTCTGGTGGTTCTTGATTTCGAAGATGCTAGACCATGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCGTAGTAGATGGCCTCAATAAAACTGGAATTCCAATTGCTCTGTGGGACTTGATAGAGCCTTACTCTCACGTTGATCATGCTAGTGGAGTTGCATTACTTGCACTTGTCATAATTGTCCTATCAAATTTGGCTTCAAATGTACCAACAGTTCTCTTGCTTGGAGCAAGAATAGCAGCCTCAGCTGCTTCAATGTCCAAAGAAGATGTGAAGAAATCATGGCTCATCTTGGCTTGGGTCAGCACTGTATCAGGGAATCTCTCACTATTGGGTTCAGCTGCTAATTTGATTGTGTGTGAACAGGCTCGCCGTGCTCCAAACCTACCCTACACATTAACCTTCTGGACTCATCTCAAATTTGGCCTTTCTTCTACTCTTATAGTTACTGCTATTGGTTTGACACTCATAAGATGA 1629 0.3947 MALASVPKVIFGLIAFGIFWILAVFPAVPFLPIGRTAGSLLGAMLMVLFRVITPDEAYATIDLQILGLLFGTMVISVYLERADMFKYIGKLLSWKSRGPKDLICRICLISAVSSALFTNDTSCVVLTEFILKIARQHNLSPTPFLVALASSANIGSSATPIGNPQNLVIAVLSKISFGSFLIGILPAMLAGVVVNALILLTMYWRLLGIHKDEEDAVAEAVAEEEFDSHRFSPATMSHVTSLNSQEWNSHLESINIQNSPQVQILRNRASANEIEIHGVPSSTFDSARNSNVSLEGINRVPSPSPTREETSFTNTSAAADTESDTHTMHSSERKSISIIKWKRVLWKTCVYSITLGMLVALLLGLNMSWTAITAALALVVLDFEDARPCLEKVSYSLLIFFCGMFIVVDGLNKTGIPIALWDLIEPYSHVDHASGVALLALVIIVLSNLASNVPTVLLLGARIAASAASMSKEDVKKSWLILAWVSTVSGNLSLLGSAANLIVCEQARRAPNLPYTLTFWTHLKFGLSSTLIVTAIGLTLIR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02712 542 MobiDBLite consensus disorder prediction 295 324 - -
Rops6g02712 542 CDD YbiR_permease 28 541 - -
Rops6g02712 542 PANTHER TRANSPORTER ARSB-RELATED 1 541 - -
Rops6g02712 542 MobiDBLite consensus disorder prediction 295 328 - -
Rops6g02712 542 Pfam Citrate transporter 27 488 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02712 Rops-Chr6 48792947 48794850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02712 - - gmx:100781849 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00921 5 17824841 17830328 Rops6g02712 6 48792947 48794850 ECH
Rops6g02712 6 48792947 48794850 Rops6g02712 6 48792947 48794850 ECH
Rops5g00920 5 17803487 17811865 Rops6g02712 6 48792947 48794850 PCT
Rops6g02712 6 48792947 48794850 Rops5g00921 5 17824841 17830328 PCT