Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00921 ATGGCTCTGGCTCCTATACCAAAAGTGGTCCTAGGTTCAATTGCCTTTGCAATCTTCTGGATATTAGCAGTTTTCCCAGCTGTGCCTTTTCTGCCCATTGGGAGAACTGCTGGGTCCCTGCTAGGTGCAATACTTATGGTTATATTCCGAGTTCTTAGTCCTGATGAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTCAGTGTTTATCTTGAAAGAGCAGACATGTTTAAATACATAGGGAAATTGCTCTCTTGGAAAAGCAGAGGAGCTAAGGACTTGCTTTGTAGAATCTGTCTGATTTCTGCAGTATCAAGTGCTCTTTTTACCAATGACACCTCTTGTGTTGTTTTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCCCATCCTTTCCTACTTGCACTTGCTTCAAGTGCTAATATTGGGTCCTCAGCAACTCCAATTGGCAACCCCCAAAATTTGGTTATTGCTGTTCAGAGTAAACTATCATTTGGAAAGTTTCTGACTGGTATTCTTCCAGCTATGCTCATAGGAGTTGTAGTGAATGCTTTAATTCTTGTAGCTATGTATTGGAGGTTATTATCTGTTCATAAGGATGAAGAAGATCCAGTTGCTGAAGTTGCAGCAGAAGATGAGGTTAATTCCCATCAGTTTTCTCCAGCCACAATGTCTCATTTTACATCCTTCAATTCTCAAGAATGGAATGCCGGTATAGAATCTAGTAATATTCAGAAGTCTCCTCAAGTTCAGACTCTAAGAAACCGATCAACTCCCAATGATAATGATATTCACAGGGTTCTTAGTAGCACACCGGATTCCACAAGAAACTCAAATGCATCAAAGGATGGGACAAATGATACACCTTCTCAGACAAAAGAAGAAACTAATCTTTCTAAAACTGTTGCAACAGTAGACAAAACAATAGAAGAACATATTATGTACTCTTCAGAAGGAAAGCACTATATCAACAAAAAATGGAAAAGGATACTGTGGAAAACTTGTGTTTACATGATTACATTAGGAATGTTGATTGCAATGCTTCTAGGTTTAAATATGTCATGGACTGCGATTTCAGCTGCACTAGCTTTGGTAATGCTTGATTTCAAAGATGCTAGGCCATGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACGGTAGATGGCTTCAACAAAACTGGAATTCCAAGTGCTCTGTGGGACTTGATGGAGCCTTATTCTCAAGTAGATCATGCTAGTGGAATAGCAATACTTGCTGTAGTTATACTTGTTCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGCACGAGTTGCAGCCTCAGCTGCTGCAATTTCAAAAGAAGATGAGAAGAAGGCATGGCTGATCTTGGCTTGGGTGAGCACCATAGCAGGGAACCTGTCACTATTGGGATCAGCTGCTAACCTGATAGTGTGTGAACAGGCTCGCCGAGCTCCAAACCTTGCATACACATTAACCTTCTGGAGCCATCTCAAATTTGGCCTACCTTCCACTCTTATAGTCACTGCTATTGGTTTGACACTCATAAGATGA 1623 0.403 MALAPIPKVVLGSIAFAIFWILAVFPAVPFLPIGRTAGSLLGAILMVIFRVLSPDEAYAAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSRGAKDLLCRICLISAVSSALFTNDTSCVVLTEFVLKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKLSFGKFLTGILPAMLIGVVVNALILVAMYWRLLSVHKDEEDPVAEVAAEDEVNSHQFSPATMSHFTSFNSQEWNAGIESSNIQKSPQVQTLRNRSTPNDNDIHRVLSSTPDSTRNSNASKDGTNDTPSQTKEETNLSKTVATVDKTIEEHIMYSSEGKHYINKKWKRILWKTCVYMITLGMLIAMLLGLNMSWTAISAALALVMLDFKDARPCLEKVSYSLLIFFCGMFITVDGFNKTGIPSALWDLMEPYSQVDHASGIAILAVVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLAYTLTFWSHLKFGLPSTLIVTAIGLTLIR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00921 540 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
Rops5g00921 540 CDD YbiR_permease 28 539 - -
Rops5g00921 540 Pfam Citrate transporter 27 487 IPR004680 GO:0016020|GO:0055085
Rops5g00921 540 MobiDBLite consensus disorder prediction 253 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00921 Rops-Chr5 17824841 17830328 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00921 - - gmx:100818695 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00921 5 17824841 17830328 Rops6g02712 6 48792947 48794850 ECH
Rops5g00921 5 17824841 17830328 Rops5g00921 5 17824841 17830328 ECH
Rops6g02712 6 48792947 48794850 Rops5g00921 5 17824841 17830328 PCT