Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00920 ATGGCATTGGCTCCTATTCCAAATGTTGTCCTGGGTTCCATTGCCTTTGCAATTTTCTGGGTATTAGCAGTGTTCCCAGCTGTGCCTTTTCTACCTATTGGGAGAACTGCTGGTTCCCTTCTAGGTGCAATGCTTATGGTCTTATTCAGAGTTATTAGTCCTGATGAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTCAGTGTTTATCTTGAAAGAGCAGACATGTTTAAGTACATAGGGAAATTGCTCTCTTGGAAAAGCAAAGGTGCAAAGGACTTACTCTGTAGAATCTGTCTGATTTCTGCTGTATCAAGTGCTCTTTTCACCAATGACACCTCGTGTGTTGTTTTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCCCATCCTTTCCTACTTGCACTTGCTTCAAGTGCTAATATTGGGTCCTCAGCAACTCCAATTGGCAACCCTCAAAATCTGGTTATAGCTGTTCAAAGTAAAATATCATTTGGAAAGTTTCTGACTGGTATTCTTCCAGCCATGCTACTAGGAATTATAGTGAACGCTTTAATTCTTATAACCATGTATTGGAAGTTATTGTCTATCCATAAGGATGAAGAGAATCCAGTTGCTGAAGTTGCAACAGAAGAGGAGGTTCATTCCCATAAGTTTTCTCCAGCGTCAATGTCTCATTTTACATCCTTTGATTCTCAAGAATCAAATGCCAGTCCAGAATCAAGTGATATTCAAAACTCTCCTAAATTTCAGACTCTGAGAGACCAATCAACTCCAAGTGACAGTGAAAATCACAGTGTTCTTAGTAACACACTGGATTCCACAAGAAACTCAAATGCATCAAAGGAGGGGACAAATGATACACCTTCTCAGACAAAGGAGGAAACTAATCCTTCAAATACTGTTGCAACAGTAGATAAACCAATAGAAGAACATGTTCTGTACTCTTCAGAAGGAAAAAGCTATATAACTGTAAAATGGAGAAGAATACTTTGGAAATCATGTGTTTACATGATCACATTAGGAATGTTGATTGCAATGCTTCTAGGTTTTAATATGTCATGGACTGCAATTGCAGTTGCACTAGCTTTGGTGATTGTTGATTTCAAAGATGCTAGGCCATGCTTTGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACTGTGGAAGGTTTCAACAAAACTGGAATTCCAGGTGCTCTGTGGGAATTGATGGAGCCTTATTCTCAAGTAGATCATGCTAGTGGAATAGCAATACTTGCTGTAGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCCACTGTTCTATTGCTTGGAGCACGAATTGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAAGCATGGCTCATCTTGGCTTGGGTCAGCACAATAGCAGGGAACCTATCATTATTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAGGCTCGCCGAACTCCAAACCTTGCATACACATTAACCTTCTGGAGCCATCTCAAATTTGGTCTTCCTTCCACTCTTATAGTCACTGCTATTGGTTTGACACTCATTAGATGA 1623 0.398 MALAPIPNVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVLFRVISPDEAYAAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSKGAKDLLCRICLISAVSSALFTNDTSCVVLTEFVLKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGKFLTGILPAMLLGIIVNALILITMYWKLLSIHKDEENPVAEVATEEEVHSHKFSPASMSHFTSFDSQESNASPESSDIQNSPKFQTLRDQSTPSDSENHSVLSNTLDSTRNSNASKEGTNDTPSQTKEETNPSNTVATVDKPIEEHVLYSSEGKSYITVKWRRILWKSCVYMITLGMLIAMLLGFNMSWTAIAVALALVIVDFKDARPCFEKVSYSLLIFFCGMFITVEGFNKTGIPGALWELMEPYSQVDHASGIAILAVVILVLSNLASNVPTVLLLGARIAASAAAISKEDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRTPNLAYTLTFWSHLKFGLPSTLIVTAIGLTLIR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00920 540 CDD YbiR_permease 28 539 - -
Rops5g00920 540 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
Rops5g00920 540 MobiDBLite consensus disorder prediction 237 315 - -
Rops5g00920 540 Pfam Citrate transporter 27 487 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00920 Rops-Chr5 17803487 17811865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00920 - - gmx:100818695 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00920 5 17803487 17811865 Rops6g02712 6 48792947 48794850 PCT