Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops5g00112 | ATGGAAATTGAAACAAGCCAAAGGGTGGTAACAAAGAAGGTATGTAACATGATACGCATAGTGTTATACATGTTGAGAGAAGGCATAGTCAAAAGCAAAGTCATGATGGAGTTACACTTACTTCTCAAACGTGGCAAACTCGCCGCCGGCAAAGCCATCGCCAACACCCTCATGCTCCGCCACCACTATACCTGCCACCGTGACAACAACAAAACAACCTTCATCTCCCCACGTGATTATGAATTCAGCTGTAGTAACAGCCCCATGTTCTCCATCAAACGCCACAAACACAACCGTCACAAATGCCATCAACACGACGACGTTTCAACCGTGAGTGCGGTTCAGAAGGTTCTCGAGATGTTGAATAATAATAGTGATAACAAGGTTGAGGGTTCTTCTTCTCCTCTTGTGGTATTACCAGGGTTTGGGGAGAGTCCTATTGGGAAACAACTGAGAATTACGGATTCACCCTTCCCTTTGAAGGATGAAGGGGATAGTGAAGTTGACGTGGCAGCTGAGGAATTTATTAAGAGGTTCTATGAGAATCTCAACCTGCAAAGCAAAATGGCTTCACCTTATCATAATAATAACTCGTGGGACAGATGA | 606 | 0.4439 | MEIETSQRVVTKKVCNMIRIVLYMLREGIVKSKVMMELHLLLKRGKLAAGKAIANTLMLRHHYTCHRDNNKTTFISPRDYEFSCSNSPMFSIKRHKHNRHKCHQHDDVSTVSAVQKVLEMLNNNSDNKVEGSSSPLVVLPGFGESPIGKQLRITDSPFPLKDEGDSEVDVAAEEFIKRFYENLNLQSKMASPYHNNNSWDR* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops5g00112 | 201 | Pfam | Cotton fibre expressed protein | 165 | 188 | IPR008480 | - | |
| Rops5g00112 | 201 | PANTHER | AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED | 8 | 192 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops5g00112 | Rops-Chr5 | 1897459 | 1898448 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops5g00112 | - | - | zju:107411297 | 206.453 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops5g00112 | 5 | 1897459 | 1898448 | Rops4g02117 | 4 | 47633604 | 47634512 | ECH | |
| Rops5g00112 | 5 | 1897459 | 1898448 | Rops7g00265 | 7 | 3433069 | 3433671 | ECH | |
| Rops5g00112 | 5 | 1897459 | 1898448 | Rops5g00112 | 5 | 1897459 | 1898448 | ECH | |
| Rops2g00325 | 2 | 4869141 | 4870273 | Rops5g00112 | 5 | 1897459 | 1898448 | PCT |