Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00325 ATGGAAATTGAACCAAACCAACCAGTGGTAGCAAAGAAGCTATGGAACATGGTACGTGTATTGTTGTTGATGTTGAGAAAAGGCATAGTCGAGAGCAAAATAATGGTAGAGCTTCACTTGATGCTCAAACGTGGCAAACTTGCTGGCAAAGCCTTAGTCAACAGCCTCATGCTTCACCACCACCAATACTCCTCCTTCACTTGTCGCTCTCACAACACACACCTCTCCTTCATATCTCCACGTGAGTACGAGTTCAGCTGCAGCAACACCCCTGCCAACAACAACCCTTTCCAAGCCATCAAACGCAAGCACCACCACCACCACCACAACCACTTTAGCCGCTTCTCAAACTCAAAGCCGTGTAAATACGACGACGTTTCCACCTTGAATGCTGTTCAAAAGGTGCTTGAGATGTTGAATAACAATGAGAAAGTGGAGGTGGGTAATTCCCCCTTGGTGACATTGCCAGGGTTTGGGAAGAGTCCTATTGGGAAACAACTAAGAGTCACTGACTCTCCTTTCCCTCTCAAGGATGAAGGTGATAGCCAAGTGGACTTGGCAGCTGAGGAATTCATTAACAAGTTCTATAAAAACCTCAACTTGCAAAAGAAAATGGCCCTTGACTCACCATACCATGACTTGTCGGGTAGATCATGA 657 0.4597 MEIEPNQPVVAKKLWNMVRVLLLMLRKGIVESKIMVELHLMLKRGKLAGKALVNSLMLHHHQYSSFTCRSHNTHLSFISPREYEFSCSNTPANNNPFQAIKRKHHHHHHNHFSRFSNSKPCKYDDVSTLNAVQKVLEMLNNNEKVEVGNSPLVTLPGFGKSPIGKQLRVTDSPFPLKDEGDSQVDLAAEEFINKFYKNLNLQKKMALDSPYHDLSGRS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00325 218 Pfam Cotton fibre expressed protein 182 206 IPR008480 -
Rops2g00325 218 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00325 Rops-Chr2 4869141 4870273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00325 - - qlo:115977914 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00325 2 4869141 4870273 Rops4g02117 4 47633604 47634512 ECH
Rops2g00325 2 4869141 4870273 Rops7g00265 7 3433069 3433671 ECH
Rops2g00325 2 4869141 4870273 Rops2g00325 2 4869141 4870273 ECH
Rops2g00325 2 4869141 4870273 Rops5g00112 5 1897459 1898448 PCT