Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04855 ATGGGTTCTCTCTTTCCGATTCGATTCAGCTTCTCTCTCTATTTCTACTTCTACCAAGATTTTTTTTTTTTGGTGTTTTGGTTTGCCAACATGTCAATGAGTGAGCGAAAGACTATCGACCTTGAGCAAGGATGGGATTTTATGCAGAAGGGTATCACCAAGCTCAAGAACATTCTAGAAGGCTTGCCTGAACCTCAGTTCAGCTCTGAGGACTATATGATGCTTTACACGACCATCTATAATATGTGCACTCAAAAGCCTCCTCATGATTATTCCCAACAACTGTATGACAAGTATAGGGAGTCATTTGAAGAGTACATCATATCAACGGTATTACCTTCTTTAAGAGAAAAGCATGATGAATTTATGTTGAGAGAGCTTGTAAAGAGATGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCTCGTTTCTTTCACTATTTGGATCGCTACTTTATTGCTCGGAGGTCACTTCCACCCCTTAATGAAGTTGGGTTGACTTGCTTCCGTGATTTGGTTTACAAGGAACTGAATGGGAAAGTGAGAGATGCAGTTATTTCACTAATTGATCAAGAACGTGAGGGAGAGCAGATTGATCGAGCTCTATTAAAAAATATATTAGATATATTTGTTGAAATTGGAATGGGGCAAATGGATCACTATGAGAATGATTTTGAAGCTGCCATGCTTGAAGACACTTCTGCTTATTATTCTCGAAAGGCTTCAAATTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCTGAGGAGTGCTTAAAACGGGAGAAAGACAGGGTTGCTCATTACTTGCACTCTAGTAGTGAGCCAAAGTTATTAGAGAAAGTTCAACATGAGCTGTTATCCGTGTATGCAAACCAACTACTCGAGAAAGAGCACTCTGGCTGTCATGCTTTACTTAGGGATGACAAGGTGGAAGACTTGTCAAGGATGTTCAGGCTATTTTCTAAGATACCTCGTGGCTTGGATCCTGTTTCTAGTATATTTAAGCAGCATGTTATCACTGAAGGTATGGCATTGGTGAAGCAGGCTGAAGATGCAGCTAGTAACAAAAAACCAGATAAAAAGGATATTATTGGTCTGCAGGAGCAGGTGTTTGTTCGGAAGGTGATTGAGCTGCATGACAAGTACCTGGCATATGTGAATGATTGTTTCCAGAATCATACTCTTTTCCACAAGGCTCTTAAGGAGGCTTTTGAGGTCTTTTGCAACAAAGGTGTTGCTGGAAGCTCAAGTGCTGAACTTCTTGCCACTTTTTGTGATAACATTCTTAAGAAAGGGGGAAGCGAAAAATTGAGTGATGAAGCAATTGAAGAAACTCTTGAAAAGGTGGTCAAGCTGCTCGCCTATATTAGTGACAAAGACTTGTTTGCTGAGTTCTATAGGAAGAAGCTTGCTCGACGGCTTCTTTTTGACAAGAGTGCCAATGAGGATCATGAGAAAAGTATTCTGACAAAATTGAAGCAGCAGTGCGGTGGACAGTTTACCTCAAAGATGGAAGGAATGGTTACAGATTTGACGCTGGCAAAGGAGAATCAAACTAGCTTTGAGGAGTATCTAAGCAAGAATCCTAATGCATACCCTGGAATAGACTTGACAGTTACAGTTCTGACTACTGGCTTCTGGCCTAGTTACAAATCTTTTGATCTCAATCTTCCAGCAGAAATGATCAAGTGTGTTGAAGTTTTCAAAGAATTTTATCAAACTAAAACAAAGCATAGAAAACTTACATGGATTTACTCCTTGGGTACCTGTAACATAAGTGGGAAATTTGAACCAAAAACTGTGGAGCTGATTGTTACAACCTACCAGGCTTCAGCATTGCTGCTTTTTAATTCCTCAGATAGACTGAGTTATTCGGAGATAATGACTCAGTTAAACTTATCAGATGACGATGTTATTAGACTGCTCCACTCCTTGTCATGTGCTAAGTATAAGATTCTTAACAAGGAACCAAACACAAAAACAATATCATCCACTGATTATTTTGAATTTAACTCAAAATTTACTGACAAAATGAGGAGAATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTAATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAGTTAGTTATGGAGTGTGTTGAGCAGTTGGGTCGCATGTTTAAGCCTGATGTCAAGGCAATTAAAAAGCGGATTGAAGATTTGATTTCTCGAGACTACCTAGAAAGAGATAAAGATAATGCAAATTTGTTCAAGGCATCAATGAGGTTAGAGAAGGAAGTGCCATCCTTCAAGTTGAACTCCCCAAGTCGTTGGAAGATGGTAAGGGGAGGCGGTGGGGGTGGTGCTGTGGTGGGGTGTGGAGGCTGTGCTTATGGTGGAGTGGTGCTGGACAGTGGTGGTGGGGAGTTGTGTTGGACAGCTGGTGGTGCATTTAGCTGCAGTTTTTGA 2508 0.4043 MGSLFPIRFSFSLYFYFYQDFFFLVFWFANMSMSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIISTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNILDIFVEIGMGQMDHYENDFEAAMLEDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVITEGMALVKQAEDAASNKKPDKKDIIGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANEDHEKSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSKNPNAYPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIKCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTVELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVIRLLHSLSCAKYKILNKEPNTKTISSTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFKASMRLEKEVPSFKLNSPSRWKMVRGGGGGGAVVGCGGCAYGGVVLDSGGGELCWTAGGAFSCSF* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04855 835 ProSiteProfiles Cullin family profile. 419 649 IPR016158 -
Rops2g04855 835 Pfam Cullin protein neddylation domain 704 766 IPR019559 -
Rops2g04855 835 SUPERFAMILY Cullin homology domain 418 687 IPR036317 -
Rops2g04855 835 SMART Cullin_Nedd8_2 701 768 IPR019559 -
Rops2g04855 835 FunFam Cullin-1, putative 297 419 - -
Rops2g04855 835 Gene3D - 691 770 IPR036388 -
Rops2g04855 835 Gene3D Cullin Repeats 32 171 - -
Rops2g04855 835 FunFam Cullin-1 like 420 533 - -
Rops2g04855 835 PANTHER CULLIN 39 770 IPR045093 -
Rops2g04855 835 Pfam Cullin family 54 677 IPR001373 GO:0006511|GO:0031625
Rops2g04855 835 Gene3D Cullin Repeats 420 533 - -
Rops2g04855 835 Gene3D Cullin; Chain C, Domain 2 537 690 - -
Rops2g04855 835 Gene3D Cullin Repeats 172 294 - -
Rops2g04855 835 SUPERFAMILY "Winged helix" DNA-binding domain 689 770 IPR036390 -
Rops2g04855 835 Gene3D Cullin Repeats 297 419 - -
Rops2g04855 835 FunFam Cullin-1 691 773 - -
Rops2g04855 835 FunFam Cullin-1 like 537 690 - -
Rops2g04855 835 SMART cul_2 450 599 IPR016158 -
Rops2g04855 835 FunFam Cullin-1, putative 172 293 - -
Rops2g04855 835 FunFam Cullin-1, putative 35 171 - -
Rops2g04855 835 SUPERFAMILY Cullin repeat-like 41 414 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04855 Rops-Chr2 87758118 87771718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04855 K03347 - gmx:100793682 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04855 2 87758118 87771718 Rops11g01582 11 24108238 24117800 PCT
Rops11g00866 11 12357712 12368731 Rops2g04855 2 87758118 87771718 PCT