Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00866 ATGTCTCTCCCCACCAAACGGTCACCCTCCTCAGCTCCCTCAACCCCAAACCCAACCCCTATGAAAAAGGCCAAGTCTCAGGCCCTTCCTTCCTCAGACAACGACGCCGTTTTGGACCCCATGCCCCTCGACAATGACGATCTCAAACCCGACCTCCCCAATGCTCGCTCCGGCGTCATGGCCGCCAATCTCTCTCGCAAGAAAGCCACTCCTCCTCAACCCCCCAAGAAGCTCCTCATCAAGCTCCACAAAGCTAAACCGACATTGCCCATAAATTTCGAAGAGGATACATGGGCGAAACTAAAGTCTGCTATTTGTGCTATATTTTTGAAACAACCTGACTCTTGTGACTTGGAGAAGCTTTATCAGGCTGTGAGTGATCTTTGCCTTTATAAAATGGGTGGAAATCTTTATCAACGGATTGAAAAGGAGTGTGAGGTACACATATCTGCAGCACTGCAGTCTTTGGTTGGCCAAAGCCCAGATTTAGTTGTTTTCCTATCTCTAGTCGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGTGGTATAGCCTTGTATCTGGATAGGACATATGTGAAGCAAACAACAAATGTACGTTCATTGTGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTGTCTCCCGAAGTACAACACAAAACCGTTACTGGTCTTCTACGAATGATTGAAAGTGAAAGATTAGGTGAAGCTGTGGATAGAACTCTTCTAAACCATCTTTTGAAGATGTTTACTGCTCTGGGAATTTATGCGGAAAGCTTTGAGAAGCCATTCCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTGTGAAATACATGCAGCAATCAGATGTTCCTGATTACTTGAAGCATGTGGAGACAAGATTGCAAGAGGAACATGAAAGATGTTTGATCTACTTGGATGCTAGTACTAGGAAGCCATTGATAGCAACAGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTATGCTTATGGATGGGAATCGTATTGAAGACCTTCAGAGAATGTACTCACTCTTTTCAAGGGTCAATGCCCTTGAATCACTGAGGCAGGCCCTTAGTTCATACATCAGGAGAACTGGGCAGGGCATTGTAATGGATGAGGAGAAAGATAAAGATATGGTTTCATCCCTTCTGGAATTTAAGGCTTCTCTTGACACAACATGGGAAGAAAGCTTTTTCAAGAATGAAGCATTCTGTAACACCATTAAAGATGCGTTTGAGCATCTTATCAATCTTCGTCAGAACCGACCTGCAGAGTTGATTGCCAAGTTTTTGGATGAGAAGCTTCGTGCAGGTAATAAGGGTACTTCAGAAGAGGAATTGGAGGGCACACTTGACAGAGTCCTGGTTTTATTCAGGTTCATTCAGGGCAAGGATGTGTTTGAGGCATTCTATAAGAAAGATCTTGCTAAGAGACTGCTGTTAGGAAAAAGTGCTTCTATTGACGCAGAGAAATCTATGATCTCCAAGTTGAAGACTGAGTGTGGCAGCCAATTTACAAACAAACTGGAAGGAATGTTTAAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCATCCCAGGCGAGAACAAAACTCCCATCAGGGATTGAAATGAGTGTTCATGTCTTGACAACTGGGTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAACGTTTACCAGGATATCTTCAAGGAGTTCTATCTAAGCAAATACAGTGGAAGACGTCTGATGTGGCAAAATTCATTAGGTCACTGTGTCCTAAAGGCAGATTTTCCTAAAGGGAAAAAGGAGTTGGCTGTCTCCCTATTTCAGACTGTTGTTCTGATGCTATTTAATGATGCTGAGAAACTAAGCTTTCAAGATATCAAGGACTCTACTGCTATTGAGGACAAGGAACTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGGGTCCTACAAAAGACGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTCAATGACGGGTTTACTGCTCCTCTTTACCGTATAAAGGTGAATGCAATTCAGTTGAAGGAGACAGTGGAGGAAAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAATATCAGGTTGATGCTGCTATCGTGAGAATAATGAAGACTAGGAAAGTGCTTAGTCACACCCTTCTCATTACTGAACTCTTCCAACAGCTGAAATTTCCAATAAAACCGGCTGATTTGAAGAAAAGGATCGAAAGCCTGATTGACAGGGAGTATCTGGAGAGGGATAAGAACAACCCTCAAATATACAATTACCTGGCATAG 2385 0.4281 MSLPTKRSPSSAPSTPNPTPMKKAKSQALPSSDNDAVLDPMPLDNDDLKPDLPNARSGVMAANLSRKKATPPQPPKKLLIKLHKAKPTLPINFEEDTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCLYKMGGNLYQRIEKECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTTNVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVETRLQEEHERCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQGIVMDEEKDKDMVSSLLEFKASLDTTWEESFFKNEAFCNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDRVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTAIEDKELRRTLQSLACGKVRVLQKTPKGRDVEDDDSFVFNDGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00866 794 SUPERFAMILY "Winged helix" DNA-binding domain 706 794 IPR036390 -
Rops11g00866 794 ProSiteProfiles Cullin family profile. 438 667 IPR016158 -
Rops11g00866 794 MobiDBLite consensus disorder prediction 17 33 - -
Rops11g00866 794 ProSitePatterns Cullin family signature. 767 794 IPR016157 GO:0006511|GO:0031461|GO:0031625
Rops11g00866 794 FunFam Cullin-4 like 553 709 - -
Rops11g00866 794 SMART cul_2 468 617 IPR016158 -
Rops11g00866 794 SUPERFAMILY Cullin homology domain 435 705 IPR036317 -
Rops11g00866 794 SMART Cullin_Nedd8_2 723 788 IPR019559 -
Rops11g00866 794 FunFam Cullin-4 like 437 548 - -
Rops11g00866 794 Gene3D Cullin Repeats 437 548 - -
Rops11g00866 794 PANTHER CULLIN 94 790 IPR045093 -
Rops11g00866 794 FunFam Cullin 3 218 334 - -
Rops11g00866 794 FunFam Cullin 4B 335 436 - -
Rops11g00866 794 Gene3D - 721 794 IPR036388 -
Rops11g00866 794 FunFam Cullin 4B 721 794 - -
Rops11g00866 794 Gene3D Cullin Repeats 85 216 - -
Rops11g00866 794 Pfam Cullin family 98 695 IPR001373 GO:0006511|GO:0031625
Rops11g00866 794 Gene3D Cullin Repeats 219 333 - -
Rops11g00866 794 MobiDBLite consensus disorder prediction 1 55 - -
Rops11g00866 794 Pfam Cullin protein neddylation domain 726 786 IPR019559 -
Rops11g00866 794 FunFam Cullin-4 85 216 - -
Rops11g00866 794 Gene3D Cullin; Chain C, Domain 2 553 708 - -
Rops11g00866 794 SUPERFAMILY Cullin repeat-like 94 434 IPR016159 -
Rops11g00866 794 Gene3D Cullin Repeats 335 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00866 Rops-Chr11 12357712 12368731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00866 K10609 - gmx:100805491 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00866 11 12357712 12368731 Rops11g00866 11 12357712 12368731 ECH
Rops11g00866 11 12357712 12368731 Rops2g04855 2 87758118 87771718 PCT