Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01582 ATGCAGAAAGGCATAATGAAACTGAAGAACATTCTAGAAGGGTTACCTGAGCCTCAGTTCAGCTCTGAGGACTATATGATGCTATACACGACCATATACAATATGTGTACTCAAAAGCCTCCTCACGATTATTCCCAACAACTGTATGACAAGTACCGAGAATCATTTGAAGAGTACATCATATCAACGGTATTACCTTCTTTGAGAGAGAAGCATGATGAGTTTATGTTGAGAGAACTTGTGAAGAGGTGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCTCGTTTTTTTCATTATTTGGATCGCTACTTTATTGCTCGAAGGTCACTTCCGCCGCTTAATGAAGTTGGGTTGACTTGCTTCCGTGATTTGGTTTACAAGGAACTAAATGGGAAAGTGAGAGATGCAGTAATTTCTCTTATTGATCAAGAACGCGAAGGAGAGCAGATTGATCGAGCTCTATTAAAGAATGTATTAGATATATTTGTTGAAATTGGAATGGGGCAGATGGATCACTATGAGAATGATTTTGAGGCTGCCATGCTCAAAGACACTTCTGCTTATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCTGAGGAGTGCTTAAAACGGGAGAAAGATAGGGTTGCTCATTACTTGCACTCTAGTAGTGAGCCAAAGTTATTAGAGAAAGTTCAACATGAGCTTTTATCCGTATATGCAAATCAACTCCTTGAAAAAGAGCATTCTGGATGTCATGCATTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGGATGTTCAGGCTTTTTTCAAAAATACCTCGAGGCTTAGATCCTGTTTCCAGTATATTTAAGCAGCATGTTAATGGTGAGGGTACAGCATTGGTGAAGTTGGCCGAAGATGCAGCAAGTAACAAGAAGGCAGAGAAAAAGGATATTGTTGGTTTACAGGAGCAGGTTTTTGTTCGGAAGGTGATTGAGCTGCATGACAAGTATCTGGCGTATGTGAACGATTGTTTCCAAAATCATACTCTTTTCCACAAGGCTCTTAAGGAGGCTTTTGAGATGTTTTGCAACAAGGGTGTTGCTGGAAGTTCAAGTGCAGAACTTCTTGCCACTTTTTGTGATAATATTCTTAAGAAAGGAGGAAGTGAAAAATTGAGCGATGAAGCAATCGAAGAAACTCTTGAAAAGGTTGTCAAGTTGCTTGCCTATATTAGCGACAAAGATTTGTTTGCTGAATTTTATAGGAAAAAGCTTGCTCGAAGGCTTCTTTTTGATAAGAGTGCCAATGATGAACACGAGAGAAGTATTTTGACAAAATTGAAGCAACAATGTGGTGGTCAATTTACCTCAAAGATGGAAGGAATGGTTACAGATTTGACGCTTGCAAAGGAGAACCAAACAAGCTTTGAGGAGTATTTAAGCAAAAGTCCTAATGCAGACCCTGGAATTGACTTGACAGTTACAGTTCTGACTACTGGTTTCTGGCCTAGTTACAAATCATTTGACCTCAATCTTCCAGCAGAAATGGTTAGGTGTGTTGAAGTTTTCAAGGAATTTTATCAAACAAAAACTAAGCACAGGAAACTTACTTGGATTTATTCCTTGGGTACCTGCAATATAAGTGGGAAATTTGAACCAAAAACTATGGAGCTGATTGTGACGACTTATCAGGCTTCAGCATTGCTTCTTTTTAATTCCTCAGATAGACTGAGTTATTCGGAGATAATGACTCAGTTAAACTTATCTGATGATGATGTTACTAGACTGCTCCACTCCTTGTCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAACACAAAAACAATATCTTCTACTGATTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGCGGATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAGAAGGTAATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGTAAAGTTTTAAATTACCAGCAGTTAGTTATGGAGTGTGTTGAGCAGTTAGGTCGCATGTTTAAGCCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGATTTGATCTCTCGAGACTACTTGGAAAGAGACAAAGATAACGCAAATTTGTTCAGGTACTTGGCATGA 2184 0.386 MQKGIMKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIISTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVNGEGTALVKLAEDAASNKKAEKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEMFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSKSPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVRCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVTRLLHSLSCAKYKILNKEPNTKTISSTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFRYLA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01582 727 SUPERFAMILY Cullin homology domain 371 640 IPR036317 -
Rops11g01582 727 Gene3D Cullin Repeats 373 485 - -
Rops11g01582 727 FunFam Cullin-1 644 727 - -
Rops11g01582 727 SUPERFAMILY "Winged helix" DNA-binding domain 642 727 IPR036390 -
Rops11g01582 727 FunFam Cullin-1, putative 1 124 - -
Rops11g01582 727 SUPERFAMILY Cullin repeat-like 14 367 IPR016159 -
Rops11g01582 727 Pfam Cullin family 9 630 IPR001373 GO:0006511|GO:0031625
Rops11g01582 727 Gene3D - 644 727 IPR036388 -
Rops11g01582 727 Pfam Cullin protein neddylation domain 657 719 IPR019559 -
Rops11g01582 727 Gene3D Cullin; Chain C, Domain 2 490 643 - -
Rops11g01582 727 FunFam Cullin-1, putative 125 246 - -
Rops11g01582 727 Gene3D Cullin Repeats 125 247 - -
Rops11g01582 727 FunFam Cullin-1 like 490 643 - -
Rops11g01582 727 PANTHER CULLIN 2 722 IPR045093 -
Rops11g01582 727 Gene3D Cullin Repeats 1 124 - -
Rops11g01582 727 FunFam Cullin-1 like 373 486 - -
Rops11g01582 727 SMART cul_2 403 552 IPR016158 -
Rops11g01582 727 Coils Coil 305 325 - -
Rops11g01582 727 Gene3D Cullin Repeats 250 372 - -
Rops11g01582 727 ProSiteProfiles Cullin family profile. 372 602 IPR016158 -
Rops11g01582 727 SMART Cullin_Nedd8_2 654 721 IPR019559 -
Rops11g01582 727 FunFam Cullin-1, putative 250 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01582 Rops-Chr11 24108238 24117800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01582 K03347 - gmx:100784626 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01582 11 24108238 24117800 Rops11g01582 11 24108238 24117800 ECH
Rops2g04855 2 87758118 87771718 Rops11g01582 11 24108238 24117800 PCT