Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03383 ATGATAATGGAGCAGGGTGGCAAAGAAGACCAGAAGACAGTGTTGAACAAATATGCCTTAGCTTGTGCCTTGGTCGCTTCAATGGTATCCATCATATCTGGTTATGATACTGGTGTTATGAGTGGAGCCATGATATTCATAAAGGAAGATCTCGGAATCAGTGATACCCAACAGGAGATTCTAGCAGGAATCTTAAACCTGTGCGCATTGGTTGGATCCATAGCTGCTGGAAGAACCTCTGATCACATTGGTCGTCGCTACACAATTTTCTTGGCCTCTGTCCTCTTCTTGATTGGTGCAGTTCTCATGGGGTATGGCCCAAACTATGCAATTTTAATGGTTGGAAGGTGTGTTGGTGGTGTTGGTGTTGGCTTTGCTCTTATGATAGCACCGGTTTACTCAGCAGAGATTTCCTCTGCATCATCCCGTGGCTTTCTAACCTCCTTACCAGAGTTTTGTATTGGTGTTGGGATCTTACTTGGCTATGTGTTAAACTACTTCTTGGGGAAATTGACCTTGAAGCTTGGATGGAGATTGATGCTTGGTATTGCAGCAGTTCCTTCACTTGCCTTGGCTTTGGGCATTCTAACTATGCCAGAGTCTCCAAGGTGGTTAGTGATGCAAGGTCGTTTAGGAAATGCCAAGAAGGTCCTATTGCAAGTTTCTAATACTACACAAGAGGCTGAACTTCGTTTCAGAGAAATAAAAGTTGCTGCTGGGTTTGATGAGAATTGCAATGATGAGATTGTGAAGCTACCTCAAAATTCCCACCATGGTGAAGGGGTTTGGAAAGAGTTGCTTTTGAGGCCCACACCTTCTGTTCGTTCAATGCTGATTGCAGCAGTTGGGATTCACTTCTTTGAGCATGCAACTGGCATTGAAGCAGTGATGTTATATAGCCCAAGAATCTTTAAGAAAGCTGGTATTCAAAGCAAGGAAATGCTCTTGCTTGCAACAGTTGGAGTTGGCCTTACAAAGGTCATTTTCTTGATAATAGCTTCATTCTTGCTTGACAGAGTTGGTAGAAGACCACTCTTGCTAATAAGCACTGGAGGAATGGTTTGTGGCCTGACCCTTCTAGGTTTTAGCTTGACCATGGTGGATCATTCCAAAGAAATGCTCTTGTGGGCCTTGAGCCTTAGCATTGTGGCCACTTACTCCTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTGTTACATGGGTCTATAGCTCTGAGATATTCCCTATGAAGTTGAGAGCACAAGGGGCAAGCATAGGAGTTGCAGTGAACAGGATCATGAATGCAGCTGTTTCCATGAGTTTTATTTCAATCTATAAAGCAATCACAATAGGTGGGAGCTTTTTCATGTTTGCTGGTATATCTGTATTAGCTTGGGTTTTCTTCTATGTTTTCCTTCCTGAAACCAAGGGCAAGGCCTTGGAAGAGATAGAGATGCTTTTCACCAAAAAATCTAGTGGTAAAAATCTAGCAACAGAAACTGATCCGAGACAGAATGTGTAG 1503 0.4311 MIMEQGGKEDQKTVLNKYALACALVASMVSIISGYDTGVMSGAMIFIKEDLGISDTQQEILAGILNLCALVGSIAAGRTSDHIGRRYTIFLASVLFLIGAVLMGYGPNYAILMVGRCVGGVGVGFALMIAPVYSAEISSASSRGFLTSLPEFCIGVGILLGYVLNYFLGKLTLKLGWRLMLGIAAVPSLALALGILTMPESPRWLVMQGRLGNAKKVLLQVSNTTQEAELRFREIKVAAGFDENCNDEIVKLPQNSHHGEGVWKELLLRPTPSVRSMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGIQSKEMLLLATVGVGLTKVIFLIIASFLLDRVGRRPLLLISTGGMVCGLTLLGFSLTMVDHSKEMLLWALSLSIVATYSYVAFFNIGLGPVTWVYSSEIFPMKLRAQGASIGVAVNRIMNAAVSMSFISIYKAITIGGSFFMFAGISVLAWVFFYVFLPETKGKALEEIEMLFTKKSSGKNLATETDPRQNV* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03383 500 ProSitePatterns Sugar transport proteins signature 1. 333 350 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 Pfam Sugar (and other) transporter 22 481 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 485 IPR045262 GO:0015144
Rops2g03383 500 NCBIfam sugar porter family MFS transporter 15 477 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 ProSitePatterns Sugar transport proteins signature 1. 76 93 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PRINTS Sugar transporter signature 382 403 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PRINTS Sugar transporter signature 405 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PRINTS Sugar transporter signature 30 40 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PRINTS Sugar transporter signature 288 298 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 PRINTS Sugar transporter signature 113 132 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 470 IPR020846 GO:0022857
Rops2g03383 500 ProSitePatterns Sugar transport proteins signature 2. 118 143 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g03383 500 Gene3D MFS general substrate transporter like domains 11 485 IPR036259 -
Rops2g03383 500 FunFam probable polyol transporter 4 12 484 - -
Rops2g03383 500 SUPERFAMILY MFS general substrate transporter 10 478 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03383 Rops-Chr2 62204533 62206797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03383 10 489 Organic Solute Cotransporters AT4G36670 66.460 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03383 - - lja:Lj4g3v0937740.1 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03383 2 62204533 62206797 Rops1g01667 1 35143096 35143506 ECH
Rops2g03383 2 62204533 62206797 Rops2g03383 2 62204533 62206797 ECH
Rops2g03383 2 62204533 62206797 Rops1g01670 1 35212563 35213966 PCT