Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01667 ATGGTTTGTAGCCTTATAGTATTAGGGTTCAGCTTGACCATGGCAGGTAATTCCCAGGAAAAGTTCTTGTGGGCATTGACCCTTAGCATAGTGGCTACTTATTTCTTTGTTGCATTTTTTAATATTGGACTTGGGCCTATCACATGGGTCTATAGTACAGAGATTTTCCCTTTGAAATTGAGAGCACAAGGGGCAAGTATAGGAGTAGCGATGAACAGGGTCATGAATGCAGCTGTTTCCATGAGTTTTATTTCAATCTACAAAGCCATCACCATAGGAGGGAGCTTCTTCATGTTTGCTGGTATCTCCATATTAGCTTGGTTGTTCTTCTACTTTTTCCTGCCTGAAACCAAAGGCAAGGCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAACTATATTAGAATGTAA 411 0.4063 MVCSLIVLGFSLTMAGNSQEKFLWALTLSIVATYFFVAFFNIGLGPITWVYSTEIFPLKLRAQGASIGVAMNRVMNAAVSMSFISIYKAITIGGSFFMFAGISILAWLFFYFFLPETKGKALEEMEMVFSKNYIRM* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01667 136 Gene3D MFS general substrate transporter like domains 1 135 IPR036259 -
Rops1g01667 136 PRINTS Sugar transporter signature 53 65 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops1g01667 136 PRINTS Sugar transporter signature 30 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops1g01667 136 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 130 - -
Rops1g01667 136 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 118 IPR020846 GO:0022857
Rops1g01667 136 Pfam Sugar (and other) transporter 1 129 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops1g01667 136 SUPERFAMILY MFS general substrate transporter 5 126 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01667 Rops-Chr1 35143096 35143506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01667 1 132 Organic Solute Cotransporters AT4G36670 69.697 7.79e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01667 - - gmx:102661233 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03383 2 62204533 62206797 Rops1g01667 1 35143096 35143506 ECH
Rops1g01667 1 35143096 35143506 Rops1g01667 1 35143096 35143506 ECH