Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00667 ATGTCTAGGAAACTAGAGAGCCCTGTTCAGACTCAAATGGCTGTGGCAGTGATTAGGAGCCCACTTGGGAGGGAGTACCATGGGAGCCAGAGGCAACCTGCTGGGAGAAGACGTGTGCTTGTTCAAACTGAGAAGGGTTGTGTCCTTGGAATGGAATTGGATCGTGGGGATAATGCACACACTGTTAAGAAGAGGTTGCAGCTTGCCCTTAATGTCCCTACTGAAGAGAGTTCTCTCACTTTTGGGGATGTTATCTTGAAAAATGACCTAAGTTCTGTTAGGAATGATTCCCCTCTTCTCTTGACAAGGAATCTTATGCATAGAAGCTCTTCCACTCCGTGCTTGTCCCCTACCGGAAGGGATATCCAGCAAAGGGATAAGAGTGGTCCAATAGAGATATTGGGGCAATCCAATAGCCTTGATAGAATGAAACATATGGTTAAGGACATTGTGAAGGCAATTAAGATGGGGATAGATCCTGTTCCTGTTCATAGTGGGCTTGGAGGTGCTTACTATTTCAGGAACAGCAGCGGGGATAGTGTTGCTATTGTGAAGCCAACTGATGAGGAGCCTTTTGCCCCGAATAACCCGAAAGGTTTTGTTGGGAATGCTCTTGGACAGCCCGGGCTGAAAAGATCTGTTCGGGTTGGGGAGACCGGGTTTAGGGAGGTTGCAGCTTATCTTCTTGACTATGATCATTTTGCTAATGTGCCTCCTACTGCCTTGGTGAAGGTTACTCACTCGATCTTCAATGTGAATGATGGGGTCAATGGGAACAACTTCAGGAGGAAGAGGCAGGTTAGCAAGATTGCGTCTTTCCAACAGTTCATACCTCATGATTTTGATGCCAGTGATCATGGGACATCAAGTTTCCCGGTGGCTTCTGTGCATCGTATAGGGATACTAGACATTAGGATTCTTAACACGGATAGACATGCTGGAAACTTGTTAGTTAGAAAACTTGGTGGTGATGGCATTGGGACTTTTGGTCAGGTGGAGTTAATTCCTATTGATCATGGGCTCTGCCTGCCAGAAACTTTGGAGGACCCATATTTTGAGTGGATTCATTGGCCTCAGGCTTCGATTCCATTTTCTGAGGATGAGCTTGCCTACATTGATAGTCTTGATCCGGCTTACGATTGCGAGATGCTTAAAAGGGAACTGCCCATGATTCGAGAGGCTTGTCTTAGAGTGTTGTTTCTCTGTACCATTTTCCTCAAGGAGGCTGCTGCTTTTGGTCTTTGTCTTGCTGAAATTGGTGAGATGATGACTCGGGAGTTCCGCAGTGGTGAGGAGGAACCCAGTGAACTTGAGGTTGTTTGTTTGGAGGCTAGGAAGTTGTTGGCAGAGAGGGAGGAACTGTCTCCTAGGACTGATTTGGGAGATGATGAATTCCTGTTTGATATAGACTGTGATGAAGTTGGATCAGATTTCACTCCAAAGATGGCAATGGATGATCCTCTAACCAGAGCAGCTTTTCATCCTGCACTTGGGAATGGGCATGCTCGCAGCCCACTTTCCAAATTGGATGAGAGCATTGAGGAGGGAGAGGAGGAAAGTGACGAAGAATCTCCTCAGGGATTTGCTACTTTCTCTGCTCAAGAAAAAATTCCAACTATTTCAGAACTTTCTGTGTCGCTGAAAAATACCATGTTAGCAGCTGAGAAAAACCAGAATCACCAGAAATATTCAGGAGAAAAAGCGGATAATGGCTATTTTGTGAATTCATCATCTGGTCATAGGAGTGCCAATGAGCAGCTTCCTGCAAGCATAAGCTTTGTAAAGCTTGCAGATATGACTGAGGATGAATGGACATTGTTTCTGGAAAAGTTTCAAGAGCTGCTGTATCCGGCATTTGCCAGGAGGAAATCCATAACCTTAGGTCAGAGGCAGAGACAGAGGCTTGGTACTTCGTGCCAGTTTTGA 1926 0.4574 MSRKLESPVQTQMAVAVIRSPLGREYHGSQRQPAGRRRVLVQTEKGCVLGMELDRGDNAHTVKKRLQLALNVPTEESSLTFGDVILKNDLSSVRNDSPLLLTRNLMHRSSSTPCLSPTGRDIQQRDKSGPIEILGQSNSLDRMKHMVKDIVKAIKMGIDPVPVHSGLGGAYYFRNSSGDSVAIVKPTDEEPFAPNNPKGFVGNALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKVTHSIFNVNDGVNGNNFRRKRQVSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLGGDGIGTFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELAYIDSLDPAYDCEMLKRELPMIREACLRVLFLCTIFLKEAAAFGLCLAEIGEMMTREFRSGEEEPSELEVVCLEARKLLAEREELSPRTDLGDDEFLFDIDCDEVGSDFTPKMAMDDPLTRAAFHPALGNGHARSPLSKLDESIEEGEEESDEESPQGFATFSAQEKIPTISELSVSLKNTMLAAEKNQNHQKYSGEKADNGYFVNSSSGHRSANEQLPASISFVKLADMTEDEWTLFLEKFQELLYPAFARRKSITLGQRQRQRLGTSCQF* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00667 641 MobiDBLite consensus disorder prediction 109 130 - -
Rops1g00667 641 MobiDBLite consensus disorder prediction 109 123 - -
Rops1g00667 641 MobiDBLite consensus disorder prediction 496 528 - -
Rops1g00667 641 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 157 456 IPR000403 -
Rops1g00667 641 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 11 637 IPR044571 -
Rops1g00667 641 Pfam Phosphatidylinositol 3- and 4-kinase 167 419 IPR000403 -
Rops1g00667 641 CDD Ubl_ubiquitin_like 39 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00667 Rops-Chr1 16924958 16928066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00667 1 641 Acyl Lipid Metabolism Gene Families AT1G26270 70.325 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00667 - - gmx:100776828 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00667 1 16924958 16928066 Rops1g00667 1 16924958 16928066 ECH
Rops1g00667 1 16924958 16928066 Rops4g01636 4 39760780 39763839 ECH
Rops1g00667 1 16924958 16928066 Rops2g00447 2 6400443 6403425 PCT