Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00447 ATGTCAGTTGCTGATTATGCTTTGAGTTCAATTTGCAAAGAGACGGTATATAGGGAAGGCCAACCAGGGCATTGTTCTGGTGAGCCAATCCTGATTTACCTTACTGTTGATGGTGCTGTGACTCCAATGCGTGTGTTGGAGTCTGATTCCATTTCTTCGGTGAAACTAAGGATTCAGCAATGCAAAGGTTTTGTGGTGAAGAAGCAGAAGCTTGTTTTTGGTGGCAGAGAGCTTGCACGCAATGATACAGTCATTAAGGAGTATGGTGTCACTGATGGTAATGTTCTTCATTTGGTTCTTCGCCTTTCTGATCTTCTTTTCATTGTTGTGAGGACCACATGTGGTAAGGAATTTGAATTTCACATTGATAGGCATAGGAATGTGGGGTATCTTAAGCAACGTATTATAAAGAAAGGGGAAGGTTTCATTGATCTTGAGGATCAAGAGCTTTTCTGCAATGATGAGAAGCTTGATGATCAAAGTCTCTTCCATGATATATGCAAGAGTGATGATGATGTGATTCATTTGATTATTAAGAAATCAGCTAAGGTCAGGACTACACCAATTCACAATGATTTGAACCTTTCCATTGAGGCATCATCTATAACAGGTGAGAGCACAGATCAAAGAGTACAAGTGGTAGAGGATAGGACTAAACAAATTAAGATAGTAAAGATACCACCTGATATAGGTTTCTGGTTGGAACCAATTGTTGTGAATCCTAAGATCAATTTTTTTCCTTTCCTTTGGGATATGATCAACTCCACATTTGAGGGTTTGAAGAAAGGAAATTGCCCTATTATGTCTTCAGAAGGCACAGGAGGGACTTACTTTATGCAAGATCCAACAGGTCAAGAACATGTTTCAGTTTTCAAGCCAATGGATGAGGAACCAATGGCTGTGAACAACCCAAGAGGCCTTCCAAGCTCATCTGATGGTGAAGGTTTAAAAAGAGGGACAAAGGTAGGAGAAGGAGCTTTGAGGGAAGCTGCAGCTTATGTATTAGATCATCCAAAGAGTGGGCCACGTTTGGTGTCAGTTGAAGCGATAGGCTTTTCTGGTGTTCCTCCTACTGTTATGGTGCAGTGCTTACATGAAGGATTTAACCACCCAAATGGGTATGCTTGCACATCAAAACATGTCAAGATCGGGTCATTACAGAAGTTCATGCATAATGATGGTAATTGTGAGGACATTGGACCCGGGGCATTTCCAGTGGAGGAGGTGCATAAGATTACAGTGCTTGACATAAGAATGGCTAATGCAGATAGGCATGCTGGGAATATACTGATAAGAAAAGAAGCAGGTGGCCAGATTAAGCTCATTCCTATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCACAAACACGTCAGCCATACTCTCCTGAGACAGTTGATTATGTCAATTCTCTGGATGCTGAAAAAGACATAGAACTTTTGAAATATTATGGATGGGATATTCCACCTCAGTGTGCAAGAACACTTCGCATTTCCACAATGTTGCTGAAGAAAGGAGTTGAGAGAGGTCTCACTCCCTATGCAATTGGAAGCATCATGTGTCGGGAAAATTTGAACAAGGAATCTGTAATTGAAGAGATTATCAGTGAAGCACAAGATTCATTGCTTCCTGGCATGAAGGAATCAGCATTTCTTGAATCCATCTCCAGAATCATGGATTCCCACCTTCATAAGATTGCAAAATAG 1737 0.4088 MSVADYALSSICKETVYREGQPGHCSGEPILIYLTVDGAVTPMRVLESDSISSVKLRIQQCKGFVVKKQKLVFGGRELARNDTVIKEYGVTDGNVLHLVLRLSDLLFIVVRTTCGKEFEFHIDRHRNVGYLKQRIIKKGEGFIDLEDQELFCNDEKLDDQSLFHDICKSDDDVIHLIIKKSAKVRTTPIHNDLNLSIEASSITGESTDQRVQVVEDRTKQIKIVKIPPDIGFWLEPIVVNPKINFFPFLWDMINSTFEGLKKGNCPIMSSEGTGGTYFMQDPTGQEHVSVFKPMDEEPMAVNNPRGLPSSSDGEGLKRGTKVGEGALREAAAYVLDHPKSGPRLVSVEAIGFSGVPPTVMVQCLHEGFNHPNGYACTSKHVKIGSLQKFMHNDGNCEDIGPGAFPVEEVHKITVLDIRMANADRHAGNILIRKEAGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQTRQPYSPETVDYVNSLDAEKDIELLKYYGWDIPPQCARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIISEAQDSLLPGMKESAFLESISRIMDSHLHKIAK* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00447 578 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
Rops2g00447 578 Pfam Phosphatidylinositol 3- and 4-kinase 272 525 IPR000403 -
Rops2g00447 578 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 263 560 IPR000403 -
Rops2g00447 578 SUPERFAMILY Protein kinase-like (PK-like) 419 576 IPR011009 -
Rops2g00447 578 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Rops2g00447 578 SMART ubq_7 106 179 IPR000626 GO:0005515
Rops2g00447 578 SMART ubq_7 30 101 IPR000626 GO:0005515
Rops2g00447 578 FunFam Phosphatidylinositol 4-kinase gamma 4 27 106 - -
Rops2g00447 578 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 40 551 IPR044571 -
Rops2g00447 578 CDD Ubl_ubiquitin_like 108 177 - -
Rops2g00447 578 Gene3D - 34 104 - -
Rops2g00447 578 ProSiteProfiles Ubiquitin domain profile. 106 183 IPR000626 GO:0005515
Rops2g00447 578 Gene3D - 107 193 - -
Rops2g00447 578 SUPERFAMILY Ubiquitin-like 101 180 IPR029071 -
Rops2g00447 578 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Rops2g00447 578 Pfam Ubiquitin family 108 180 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00447 Rops-Chr2 6400443 6403425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00447 1 577 Acyl Lipid Metabolism Gene Families AT5G24240 56.627 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00447 - - gmx:100809172 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00667 1 16924958 16928066 Rops2g00447 2 6400443 6403425 PCT