Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1962 ATGAACCAGGGTCCGGGCTTATATTTTGATATTGGAAAGAAGGCCAGAGATGTTCTTCATAAGGACTATTGTCAACAACCACCAATTCACTTTAACTACAGATTCTTCGATTGGAATTTAGATCTCTCCTGTGAAGAAGAACTTTTGCATGGACTAAAGGGCATTTTCGCATGTAACATACCTGGCTCTGGGAAGTTGGAACTTCGACACTTGAGTAGATTCAGTGGGTTTAGTGCAAGCATTGGATTATTGGGAGAGGCAGAAAAAGGATATAACCCTGTAGCAAACCTCTCTGGTCTTATAGGAACCAGAATTCTCAACCTGGGAGCTAATCTTGCCTATGACCTATCAGGAGGAGGAACAAGGACAACTAACAATCTGAATGCTGGGTTGAGCCTGAACAGTCCCTACCTTGTTGCTTCCGTGACCTTGCATGACTATTTTCAAACTTTGAAAGGTTGCTGTTATTTTGAAGTGAATCCCCTGTCCAAGACTGCAATTGCAGCAGAGGTGAAGTATGACCTTGCAGATGATGAGACTATTGGTGTAACAGTTGGTGCTCAGCATGCATTGTTTCCTTGGACGCTGTTAAAGGCTCGACTAAGCAGTAGTGGCAGGGTAGGCGCTCTTATTCAACAGAAGTTAGGGAGGAAGTTTTCCATAACTGTGGCAGGAGAGGTCAATTTGAATGAGAAAGATAAAGAAAAGTTTCCCAAGGTTGGAGTCTTCATGGCTATGAAATAA 744 0.4288 MNQGPGLYFDIGKKARDVLHKDYCQQPPIHFNYRFFDWNLDLSCEEELLHGLKGIFACNIPGSGKLELRHLSRFSGFSASIGLLGEAEKGYNPVANLSGLIGTRILNLGANLAYDLSGGGTRTTNNLNAGLSLNSPYLVASVTLHDYFQTLKGCCYFEVNPLSKTAIAAEVKYDLADDETIGVTVGAQHALFPWTLLKARLSSSGRVGALIQQKLGRKFSITVAGEVNLNEKDKEKFPKVGVFMAMK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1962 247 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 247 - -
Pvu9g1962 247 Gene3D Porin 3 247 IPR023614 -
Pvu9g1962 247 Pfam Eukaryotic porin 39 237 IPR027246 GO:0005741|GO:0055085
Pvu9g1962 247 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 247 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1962 Pvu-Chr9 28175701 28177901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1962 K15040 - gmx:100803984 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1990 3 40505364 40507402 Pvu9g1962 9 28175701 28177901 ECH
Pvu8g0445 8 3775439 3779229 Pvu9g1962 9 28175701 28177901 ECH
Pvu9g1962 9 28175701 28177901 Pvu9g1962 9 28175701 28177901 ECH