Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0445 ATGGCTAAGGGTCCCGGTCTCTACACTGATATCGGCAAGAAAGCCAGGGATCTGCTGTTCAAGGACTACCACAGTGACCAGAAGTTCACCGTCACCACCTACTCGCCCACTGGAGTTGCTATTACCTCATCAGGAACCAGGAAAGGTGAACTGTTTGTGGCTGATGTCAACACCCAGTTGAAGAACAAAAACATCACTACTGATATCAAAGTTGATACAGATTCTAATCTCTTCACAACTATCACTGTCAATGAACCTGCTCCTGGTCTTAAGGCTATCTTTAACTTCAAAGTTCCTGACCAGAGGTCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTTGGGTTGACGGCAAACCCAATTGTTAACTTCTCTGGTGTTGTAGGAACCAATATTCTTGCTCTTGGTGCTGATCTTTCTTTTGACACCAAAATTGGGGAGTTAACAAAATCCAATGCTGGACTGAGCTTCACTAAGGATGACTTGATTGCCTCGTTGACTCTGAATGACAAAGGTGATGCTCTGAATGCTGCATATTATCATGTAGTTAACCCCTTGACCAACACTGCTGTTGGTGCTGAGGTCACTCATCGATTCTCAACTAATGAGAACACTCTCATCCTTGGTACCCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTCACCAACTTTGGTAAGACAAGTGCTCTCATCCAGCATGAGTGGCGTCCCAAATCATTTTTTACAATTTCTGGTGAGGTAGACACCAAGGCCATTGAGAAGAGTGCCAAGGTTGGATTGAGTTTGGTTCTCAAACCCTAA 831 0.4465 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTVTTYSPTGVAITSSGTRKGELFVADVNTQLKNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSGVVGTNILALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLNDKGDALNAAYYHVVNPLTNTAVGAEVTHRFSTNENTLILGTQHALDPLTTLKARVTNFGKTSALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0445 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Pvu8g0445 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Pvu8g0445 276 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 276 - -
Pvu8g0445 276 Gene3D Porin 1 275 IPR023614 -
Pvu8g0445 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Pvu8g0445 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0445 Pvu-Chr8 3775439 3779229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0445 K15040 - gmx:100170728 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0445 8 3775439 3779229 Pvu8g0445 8 3775439 3779229 ECH
Pvu8g0445 8 3775439 3779229 Pvu3g1990 3 40505364 40507402 ECH
Pvu8g0445 8 3775439 3779229 Pvu9g1962 9 28175701 28177901 ECH