Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1990 ATGAGCACCACTCCGGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTGCACAAGGACTATTCAAATCTGTCACCAATTCACTTTCATTACCAATTCATGGACTACAACGTAGACCTCTCTTGTCAATTAAATGAAATTGTGCCTGGATTCAGGAGCCTTTTCAAGTGCACCATACCTGATTCTGGGAAGGTAGAACTACAACACTTGACTAACTACACTGGACTTACTGGATGCATTGGACTAGAAGGAAACGTGGAAAAAGGATATGCCCCTGTTCTAAACATGTCGGGTCTTGTGGGAACAAACATCTTGTCCCTTGGAGGCAATGTTGCTTTAGACATACCAACAAGATCATTCAGTAATATGAATGCTGGAGTAGGCCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCATGCATGACAGTTTCGACATTCTGAAAGCCTCCTGTTATCATGAAGTGAACCCCCTAAGCAAGACTGCCATTGCAGCTGAGCTGAAGCATAGCTTGTCAATGGGGGAGAGTAGTGCCACCATTGGTGCTCAGCATGCACTTTTTCCGCAAACGTTAGTAAAGGCTCGATTTGACACCTTTGGCAAGGCAGGCGCTGTTATTCAACAAGGGTTCTTGGAGAGATTTTATGTGTCTATGGCTGGAGAAGTGGATTTTAAGACCACAGACAATAACTTGCATCCCAAGGTTGGAGTCTCTGTGGCTTTAAGACCCTAG 738 0.4431 MSTTPGIYFDIGKKAKDVLHKDYSNLSPIHFHYQFMDYNVDLSCQLNEIVPGFRSLFKCTIPDSGKVELQHLTNYTGLTGCIGLEGNVEKGYAPVLNMSGLVGTNILSLGGNVALDIPTRSFSNMNAGVGLNTPFLVASLTMHDSFDILKASCYHEVNPLSKTAIAAELKHSLSMGESSATIGAQHALFPQTLVKARFDTFGKAGAVIQQGFLERFYVSMAGEVDFKTTDNNLHPKVGVSVALRP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1990 245 Pfam Eukaryotic porin 37 234 IPR027246 GO:0005741|GO:0055085
Pvu3g1990 245 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 245 - -
Pvu3g1990 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Pvu3g1990 245 Gene3D Porin 2 244 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1990 Pvu-Chr3 40505364 40507402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1990 K15040 - gmx:100787061 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1990 3 40505364 40507402 Pvu9g1962 9 28175701 28177901 ECH
Pvu8g0445 8 3775439 3779229 Pvu3g1990 3 40505364 40507402 ECH
Pvu3g1990 3 40505364 40507402 Pvu3g1990 3 40505364 40507402 ECH