Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2830 ATGTGGAATCCACGCGCTCTCTCTGCTCCACTCGCGGCGCTTCTTCTTCTTCTTCACGCTCTTATTGCTATCGCCTCTGCTCAGAGATCTGCCTGGAAAACACTCAACGGAGGTCCCCCGTTGGTTGTGGCACGTGGTGGATTTTCAGGGATTTTTCCTGATTCCAGTGATAGTGCCTATAGTTTGGCAGTAATAACGACTGGGCCGGATGTGTATGTATCGTGTGATGTGCAGTTAACAAAAGATGCAGTTGGGATTTGCCTACCAGACATAAACCTTGCAAATTCTACTTACATTGCCACCACATACCCAAATGATACCACAAGTTACTTGGTTAATGGAGTACCCATCAGGGGCTATTTTTCTCTGGATTACACCATGAAGCAGCTAAGCGATGTCTTATTAACTCAGGGAGTATATTCTCGAACCAACCGGTTTGATGGCATTGGTTTTCTAATTCTTACTGTTGATGATTTGGTTACACTTAATCAAAAACCAAAAGGAATATGGTTGAATATTCAGCACGATACATTCTACGCACAGCACAATTTGAGCATGAGAAGCTTTGTGATTTCAGCTTCTAAAAGAATAGTTTTCAGTTATATCTCTTCACCGGAGGTTAATTTTCTGAGAGGTATATCTTCACGCTTGAACCTAAAAACAACAAAACTTGTCTTCCGGTTTATGGATAAGGATGAGTTGGAACCATCAATCAATCAGACTTATGGATCGCTTTTAAAGAATCTTACATTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCAAAGGGATACATATGGCCAGTAGATGCAAGTCTTTATCTACAACCACATACATCTTTGGTCTCGGATGCACATAAAGTGGGGCTAGAAGTTTTTGGATCAGATTTTGTGAATGATGTTCCATCTAGCTTCAATTACAGTTATGATCCACTTACTGAGTACCTCCAGTTCATAGACAACGGTGAATTCTCTGTTGATGGTGTGCTGTCTGATTTCCCCGTTACTCCATTTGAAGCTATAGGTTGCTTTTCTCAGTTAGGCACCAATGCTACAAAACAAGATAAAACTTTGGTTATTTCAAAATATGGAGCAAGTGGGGATTATCCTGCTTGTACCAACTTAGCATATGAGAAGGCCATAGCTGATGGTGTGGATGTTCTTGACTGTCCGGTTCAAATGTCAAAGGATGGAACACCATTTTGCTTAAACTCCATTGATCTTATAGAGAGTACTGCAGTTGCCCAATCAAACTTCAGCAAATTTGCCATGACTATCCCTGAGATCAAAACTGGCAGTGGCATATTTGCATTCAACCTCACGTGGAATGATATAAAAGATTTGACCCCCTCAATATTGAATCCTTTTGCAAAATACAGACTGTTCAGGAATCCAAAATCTAAGAATTCCGGGAGATTGACGTCGTTATCACATTTCTTGTCCTTGACAAAAAATCAGACTTCTCTATCTGGTATCTCTATCAGTGTTGAGAATGCAGCCTATCTTGCTGAAAAGCAAGGATTAAGTGTGATTGATGCAGTCATCAATGCTTTGAGCAGTGCAGGTTATGATAAACCCGGATCCCAAAAAGTTTATATTCAATCCACTAATAGCTCTGTACTGCTAAAGTTCAAAGAGAAAACCAGTTACGAGCTTGTGTACAAGATTGACGAGATTGTGGGTGATGCTGCATCAGCAGCTGTTGAGGATATCAAGAAATTTGCCAGTGCTGTGATTGTCAGCAAGGACTCTGTATTTTCTAATAATGATAAATTCCTAACAAGCACTACGAAAATCGTGCCAAAGCTAAACGCTGCAAACCTCTCAGTTTTTGTAGAGACATTCAGCAATGAGTTTGTTTCTCAATCATGGGATTTCTTCTCAGATGCAACTGTTGAGATAAACTCATATTTAAATGCTGAGGGCGTAAAAATTGATGGTATCATCACTGACTTCCCTAAAACTGCCGACAGATACAGAAGGAACAAATGCTTAAATTTGGGTGACAAGAAACCTACTTACATGGACCCTGTTCAACCAGGTGGTCTTTTTGGACTGATTACCCCAGGTTTCTTGCCTCCAACTGAAGCTCCACTCCCACCCTTGACAGAATCTGAAGTTGCAGAGCCAGCTTTGCCTCCTGTTGTTAAAATAGCCCCAGCTTCCAGCCCCACTGCTGGAACCAAAGCGCCACCAGGAAATGCACAGCCTAAGGTTGCTGTCTGCTTCTTCTTTTCCTCTCTGGCTGTGTTCATAGCTTCCCTTCTTCTGCTCTGA 2277 0.4137 MWNPRALSAPLAALLLLLHALIAIASAQRSAWKTLNGGPPLVVARGGFSGIFPDSSDSAYSLAVITTGPDVYVSCDVQLTKDAVGICLPDINLANSTYIATTYPNDTTSYLVNGVPIRGYFSLDYTMKQLSDVLLTQGVYSRTNRFDGIGFLILTVDDLVTLNQKPKGIWLNIQHDTFYAQHNLSMRSFVISASKRIVFSYISSPEVNFLRGISSRLNLKTTKLVFRFMDKDELEPSINQTYGSLLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVSDAHKVGLEVFGSDFVNDVPSSFNYSYDPLTEYLQFIDNGEFSVDGVLSDFPVTPFEAIGCFSQLGTNATKQDKTLVISKYGASGDYPACTNLAYEKAIADGVDVLDCPVQMSKDGTPFCLNSIDLIESTAVAQSNFSKFAMTIPEIKTGSGIFAFNLTWNDIKDLTPSILNPFAKYRLFRNPKSKNSGRLTSLSHFLSLTKNQTSLSGISISVENAAYLAEKQGLSVIDAVINALSSAGYDKPGSQKVYIQSTNSSVLLKFKEKTSYELVYKIDEIVGDAASAAVEDIKKFASAVIVSKDSVFSNNDKFLTSTTKIVPKLNAANLSVFVETFSNEFVSQSWDFFSDATVEINSYLNAEGVKIDGIITDFPKTADRYRRNKCLNLGDKKPTYMDPVQPGGLFGLITPGFLPPTEAPLPPLTESEVAEPALPPVVKIAPASSPTAGTKAPPGNAQPKVAVCFFFSSLAVFIASLLLL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2830 758 ProSiteProfiles GP-PDE domain profile. 357 660 IPR030395 GO:0006629|GO:0008081
Pvu8g2830 758 CDD GDPD_SHV3_repeat_1 40 340 - -
Pvu8g2830 758 ProSiteProfiles GP-PDE domain profile. 40 341 IPR030395 GO:0006629|GO:0008081
Pvu8g2830 758 SUPERFAMILY PLC-like phosphodiesterases 39 339 IPR017946 GO:0006629|GO:0008081
Pvu8g2830 758 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 17 757 - -
Pvu8g2830 758 SUPERFAMILY PLC-like phosphodiesterases 356 660 IPR017946 GO:0006629|GO:0008081
Pvu8g2830 758 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 17 757 - -
Pvu8g2830 758 Gene3D Phosphatidylinositol (PI) phosphodiesterase 356 659 IPR017946 GO:0006629|GO:0008081
Pvu8g2830 758 Gene3D Phosphatidylinositol (PI) phosphodiesterase 39 340 IPR017946 GO:0006629|GO:0008081
Pvu8g2830 758 CDD GDPD_SHV3_repeat_2 358 659 - -
Pvu8g2830 758 Pfam Glycerophosphoryl diester phosphodiesterase family 47 334 IPR030395 GO:0006629|GO:0008081
Pvu8g2830 758 Pfam Glycerophosphoryl diester phosphodiesterase family 364 655 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2830 Pvu-Chr8 58350579 58355815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2830 5 758 Receptor kinase-like Gene Family AT4G26690 55.277 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2830 - - gmx:100792750 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2830 8 58350579 58355815 Pvu8g2830 8 58350579 58355815 ECH
Pvu6g0529 6 16533838 16550163 Pvu8g2830 8 58350579 58355815 PCT
Pvu8g2830 8 58350579 58355815 Pvu6g0525 6 16492456 16499080 PCT