Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0529 ATGTGGAAACCACGCTCTCTTCTCCGTTCACTCTTTCTCCTTCATCTTCTTCTTCTTCTTCACTCGGCGCTGCCTCTGGTTTCTGCACAAGTATCCAACGCAACCACTTGGGACACTCTCTCCGGAAATCCACCGTTGGTGATAGCACGTGGTGGTTTTTCAGGGATATTTCCTGATTCGAGTGAAAGTGCTTATATTTTTGGTGTAACAGCTAGTTTAAAAAATGTGATAGTATGGTGTGACGTGCAATTAACGAAAGATTCGCAGGGGATCTGCGTCCCAAACGTGAAGCTTGAAAATGCCACTGATATTGCTCAAAATAATAAATATAAAAGTAAGTCTTACCAAGTTAATGGTGTACAAACCGATGGCTATTTTTCTGCGGACTACACCCTAAAGGAGCTACGTTCCAATGTCTTCTTGGTTCAGGGAGATTATTCTCGACCAACCTTAGGTGGAGTATTCGAAATTCTTACGGTGAAAGATGTGGTTAAAACAACATTCCCGCAAGGATTGTGGTTGAACATACAGCATGATGCATTCTACACTCAACACAATTTGAGTATGAAAAATTTCATACGTTTTGTTTACACAACAGTAAATGTCAGTTACATCTCATCACCTGAAGCTGGTTTCCTCAAAAGTATAAAAACAGACATCAATCCAAAAATAACAAAACTGGTCTTCAGGTTTCTGGGAAAAGAGGAAGTAGATCCATCAACCAAACAGACTTATGGTTCACTATTACAAAATCTAACATTTATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAAGATTACATATGGCCTGTGGATCCAACAAGTCACTATCTACAACCACATACATCTTTGGTCTCCGATGCGCACAAAGTGGGGCTAGAAGTCTTTGCTTCAACTTTTCAAAATGATATTCCAATCAGCTATAATTATAGCTATGACCCTTTTTTCGAGCACCTGAGTTTCATTGAGAATGGAAACTTTTCTGTTGATGGTGTGTTGTCTGACTTCCCCCTAACGTCATCTGCAGCTATAGACTGCTTTGTGCACATGGGCCTCAATGCTCCAAAAAAAGTTAACACTTTGGTCATCTCAAAATATGGAGCAAGTGGAGATTATCCTCCTTGTACCGACTTAGCATATAAAAAGGCTATTTTAGATGGTGTGGATATTCTTGACTGTCCTGTTCAAATGTCAAAGGATGGAATACCATTTTGCTTTAACTCTATTGATCTTATTAAGAGCACAAATGTTGCTAAATCAAGTTTCAGCAACCTAAGCAAATCTATTCCAGAGATCCAAGCTGGTGATGGAATATTTGCATTCGACTTGGCATGGAATGATATAAAAAGCTTGAGTCTCTCAATGTTGAACCTGTTTAGCGAATTCAATTTGTATAGAAACCCAAAATTCAACGAGAAAGTATCATTGTTAACATTGTCAGAGTTCTTGAACTTCACACAAGGTCATACTTCCCTATTAGGTGTTGTGATCATCATTGAGAAAGCACCTTATCTTGCAAGGGAACAAAACTTAAGCGTGATTGATGCAGTGAGTGATACTTTGAGCAAAGCAGGTTATGACAAAACAGGGACTCCAAACGTCATGATTCAGTCCAGTGATAGTTCTGTACTACTGAAATTCAAGGAGAAAACAAAGTATGAACTTGTCTACTCGATTCCAGAGATAGTTAGTGATATAGTTGATTCAGCTCTTTCGGATATCAAAACATTTGCTCATTCTGTAGTTGTCGTAAGGGACTCTGTGTACCCGAGAAATGCTTTGTTCTTCGTGACTGGCTCTACAAAAACTGTCTCAAAGTTCAAATCTGTTAATCTCTCTGTTTATGTACAAACATTCCACAATGAGTTTGTATCTCAGGCATGGGATTTCTTGTCAGATGCAACTGTGCAGATCAACACATTTGTTCAGGATGCTGGAATTGATGGTGTCATCACAGGCTTCCCTCAAACAGCCAATAGATACAGAAGGAACAGATGCTTAAATTTGGGTGACAGCACTCCTCCTTACATGAGACCAGTTGAAATAGGTGGGCTTTTTCAACTCGTAGACAAATCTTCCTTACCACCAGCTATGGCTCCAGCCCCTTCCCTGACCGAAGCTGATGTTACAGAACCCCCTTTGGCTCCTTTTTCTAAAATAGCCCCATCTAACTCCATTGATGGAGCTGCACCAGGAGCACAACCACCACAAAATGCACAGGCTAAGGTTGCTGTCTGCTTCTTCATGTCCTCTCTGACAGTGCTTCTAGCCTCTCTTCTACTTTGA 2289 0.4024 MWKPRSLLRSLFLLHLLLLLHSALPLVSAQVSNATTWDTLSGNPPLVIARGGFSGIFPDSSESAYIFGVTASLKNVIVWCDVQLTKDSQGICVPNVKLENATDIAQNNKYKSKSYQVNGVQTDGYFSADYTLKELRSNVFLVQGDYSRPTLGGVFEILTVKDVVKTTFPQGLWLNIQHDAFYTQHNLSMKNFIRFVYTTVNVSYISSPEAGFLKSIKTDINPKITKLVFRFLGKEEVDPSTKQTYGSLLQNLTFIKTFASGILVPKDYIWPVDPTSHYLQPHTSLVSDAHKVGLEVFASTFQNDIPISYNYSYDPFFEHLSFIENGNFSVDGVLSDFPLTSSAAIDCFVHMGLNAPKKVNTLVISKYGASGDYPPCTDLAYKKAILDGVDILDCPVQMSKDGIPFCFNSIDLIKSTNVAKSSFSNLSKSIPEIQAGDGIFAFDLAWNDIKSLSLSMLNLFSEFNLYRNPKFNEKVSLLTLSEFLNFTQGHTSLLGVVIIIEKAPYLAREQNLSVIDAVSDTLSKAGYDKTGTPNVMIQSSDSSVLLKFKEKTKYELVYSIPEIVSDIVDSALSDIKTFAHSVVVVRDSVYPRNALFFVTGSTKTVSKFKSVNLSVYVQTFHNEFVSQAWDFLSDATVQINTFVQDAGIDGVITGFPQTANRYRRNRCLNLGDSTPPYMRPVEIGGLFQLVDKSSLPPAMAPAPSLTEADVTEPPLAPFSKIAPSNSIDGAAPGAQPPQNAQAKVAVCFFMSSLTVLLASLLL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0529 762 Gene3D Phosphatidylinositol (PI) phosphodiesterase 44 344 IPR017946 GO:0006629|GO:0008081
Pvu6g0529 762 Gene3D Phosphatidylinositol (PI) phosphodiesterase 360 662 IPR017946 GO:0006629|GO:0008081
Pvu6g0529 762 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 17 761 - -
Pvu6g0529 762 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 17 761 - -
Pvu6g0529 762 ProSiteProfiles GP-PDE domain profile. 45 345 IPR030395 GO:0006629|GO:0008081
Pvu6g0529 762 SUPERFAMILY PLC-like phosphodiesterases 361 663 IPR017946 GO:0006629|GO:0008081
Pvu6g0529 762 Pfam Glycerophosphoryl diester phosphodiesterase family 80 339 IPR030395 GO:0006629|GO:0008081
Pvu6g0529 762 Pfam Glycerophosphoryl diester phosphodiesterase family 368 658 IPR030395 GO:0006629|GO:0008081
Pvu6g0529 762 ProSiteProfiles GP-PDE domain profile. 361 663 IPR030395 GO:0006629|GO:0008081
Pvu6g0529 762 SUPERFAMILY PLC-like phosphodiesterases 43 343 IPR017946 GO:0006629|GO:0008081
Pvu6g0529 762 CDD GDPD_SHV3_repeat_1 45 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0529 Pvu-Chr6 16533838 16550163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0529 5 762 Receptor kinase-like Gene Family AT4G26690 50.525 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0529 - - gmx:100814941 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0529 6 16533838 16550163 Pvu8g2830 8 58350579 58355815 PCT