Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0525 ATGCGGCACTTCATGGCTCTCTCTAGGGTACTTCCTATACTCATTCTGCAGTATTCATTGGTAGCACTGGTTTCTTCAGCAGGACCACCTAGTGGCTGGAAAACATTGCAAGGATCTCCACCACTGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGTTCACTTGCCTATAATTTGGCACTTAACACTAGTAGCCCAAATGTGATTCTATGGTGTGATGTGCAATTAACAAAGGATGGCACTGGGATTTGTTTCCCAGAGCTTAAACTCGACAATGCCACTGACATTTCAGTTGTTTACCAAGGCAAGGCAAAGGATCACTTTGTTAGTGGGGTCCCAACCCGGGGATGGTTTTCTGTAGACTACAACTTCCAAGAACTAGCAAATGTCTCTCTTGTTCAGGGAGTTTACTCTCGGACTAATGTGTTCGATGGCAACAAGCTTCCCATTCTCCATGTTGAAGAAGTAGCTAACCTGATAAAATCACCATCTACAGGCCTGTGGTTAAACATTCAGCATGATTCATTCTTCAAGCAACAGAATTTGAGTGTAGAAACCTTTCTACGATCTCTCGTTGCTAAAAATGTAACTGTCAGTTACATTTCATCACCTGATGTGGGTTTCTTAAAGAGAGTTAAATCAATCTTTAGTCATGGAACAACCAGCTTGATCTTCAGGGTTCTAGAGCAGTCTAAGATTGAACCTACAACCAATCAGTCTTATGGTAAACTCCTGAAAAATCTTGCGCAAATCAAGGCATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCAAGCCTTTATCTACAACCACATACCTCTCTTGTCTCAGATGCTCACAAAGAAAAGTTGCAAGTTTTTGTATCAGACCATATCAATGATGTTCCATTTAGCTACAATTTCAGCTATGATCCTGTGGCTGAGTGTCTATCTTTCTTTAACGTTGGTGATTTCTCCGTTGATGGTGTGTTGTCTGACTTCCCAGTTACTCCATCTGTAGCCATAAATTGCTTTTCTGGCCAAGGGAAAAATGGCACTAAACAAGTGGACACTTTGGTTATCACAAAATATGGAGCAAGTGGAGATAATCCTGCTTGTACTGACCTTGCATATAAGAAAGCTAAATCAGACGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAACACCCTTTTGCTTAAGCTCTATAGACCTTTCAGAAAGCACAACAGTTGCTGATACAAACTTCAAAACCCGTTCTACAACTATTCAGGAGATCAAAAACAGCAGTGGCATATATACATTCAGCTTGACATGGGACGAGATAAAAACATTGACTCCCTCAATATTGAAACCTTATGGGAAATACAGTTTGATCCGGAATCCAAAACTCAAAAATCAAGGAAAGCTGATAACCTTGTCTAAGTTTTTGTCCTTGACTAAAGGCTCTCTCATCTTGATCAGCATAGAGAATGCTGCCTATCTGGCAGAGAAGCAGAATTTAAGTGTGATCAATGCAGTTCTTGATGCTCTAAACAAAACAAAACCAACATCATACAAAGTTATGATTCAGTCAACTCATAGCTCTGTGCTTAAAATATTTGATAAATCCAAATTTGAAAGGGTTTACAAGGTTGATGAGAACATTGGCGACGCTGCTGTCTCGGCTATTAAGGACATCAAAACATTTGCTGATTCTGTGGTAATAGGAAAGAAGTCTGTTTTTCCTGAAACTTCAGCCTTTTTAGTTAACTCTACAAACATTGTGGCAAAGCTAAAATCATTTAAGCTCCGAGTTTATGTAGAAACTTTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCTGATGCATCTATTGAGATAAATTCATTTGTCATTGGAACCAAGGTTAATGGCATCATTACTGATTTCCCCAAGACAGCTAACAGATATAGGAGGAACTTGTGTTTAAAGAATGTCAACAAAGCACCTTACATGAGCCCTATTGAACCTGGCAAACTTTATCAACAAATTTCTGATTTTTTCCTTCCACCACTTCCTCCTCCACCCCCAGTCTTGATTGATAGTAATGTGACAGAGGCACCTTTGCCTAGTGTTTCTGGAAAAGTTCCAACAACCTAG 2145 0.4009 MRHFMALSRVLPILILQYSLVALVSSAGPPSGWKTLQGSPPLVIARGGFSGIFPDSSSLAYNLALNTSSPNVILWCDVQLTKDGTGICFPELKLDNATDISVVYQGKAKDHFVSGVPTRGWFSVDYNFQELANVSLVQGVYSRTNVFDGNKLPILHVEEVANLIKSPSTGLWLNIQHDSFFKQQNLSVETFLRSLVAKNVTVSYISSPDVGFLKRVKSIFSHGTTSLIFRVLEQSKIEPTTNQSYGKLLKNLAQIKAFASGILVPKGYIWPVDSSLYLQPHTSLVSDAHKEKLQVFVSDHINDVPFSYNFSYDPVAECLSFFNVGDFSVDGVLSDFPVTPSVAINCFSGQGKNGTKQVDTLVITKYGASGDNPACTDLAYKKAKSDGADVLDCPVQMSKDGTPFCLSSIDLSESTTVADTNFKTRSTTIQEIKNSSGIYTFSLTWDEIKTLTPSILKPYGKYSLIRNPKLKNQGKLITLSKFLSLTKGSLILISIENAAYLAEKQNLSVINAVLDALNKTKPTSYKVMIQSTHSSVLKIFDKSKFERVYKVDENIGDAAVSAIKDIKTFADSVVIGKKSVFPETSAFLVNSTNIVAKLKSFKLRVYVETFSNEFVSQAWDYYSDASIEINSFVIGTKVNGIITDFPKTANRYRRNLCLKNVNKAPYMSPIEPGKLYQQISDFFLPPLPPPPPVLIDSNVTEAPLPSVSGKVPTT* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0525 714 Pfam Glycerophosphoryl diester phosphodiesterase family 367 648 IPR030395 GO:0006629|GO:0008081
Pvu6g0525 714 Gene3D Phosphatidylinositol (PI) phosphodiesterase 359 652 IPR017946 GO:0006629|GO:0008081
Pvu6g0525 714 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 341 IPR017946 GO:0006629|GO:0008081
Pvu6g0525 714 SUPERFAMILY PLC-like phosphodiesterases 361 653 IPR017946 GO:0006629|GO:0008081
Pvu6g0525 714 ProSiteProfiles GP-PDE domain profile. 360 653 IPR030395 GO:0006629|GO:0008081
Pvu6g0525 714 ProSiteProfiles GP-PDE domain profile. 41 344 IPR030395 GO:0006629|GO:0008081
Pvu6g0525 714 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 5 713 - -
Pvu6g0525 714 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 5 713 - -
Pvu6g0525 714 SUPERFAMILY PLC-like phosphodiesterases 40 339 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0525 Pvu-Chr6 16492456 16499080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0525 1 714 Receptor kinase-like Gene Family AT4G26690 55.310 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0525 - - gmx:100813869 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2830 8 58350579 58355815 Pvu6g0525 6 16492456 16499080 PCT