Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2141 ATGAGCAAAAGCAACACAACAATGAGCTTAAGAGGTGTAATCTTGTGGTGTGTTTGGTTGTGTTTGTTGCAACTATCACTGGGAGCTGTGAGGCACTACAAGTTAGATGTGAAGTACAGATATGGTGAGCCAGATTGCAAAGAGCAAGTTGTGATGGGAATCAATGGTCAGTTTCCAGGCCCAACCATAAGAGCAAAAGCTGGAGACACCCTTCATATTGCTGTCACCAATAAGCTTGTCACAGAGGGAACAGTTATTCACTGGCATGGAATTAGACAGTATGGAACGCCTTGGGCAGATGGAACTGCTTCCATTTCTCAGTGTGCTATATCCCCCGGAGAAACTTTTCATTACAGATTCACAGTTGACAAGGCTGGTACATACTTCTACCATGGACACTATGGTATGCAGAGAACAGCAGGGTTGTATGGTTTTCTAATAGTGGATTTAGCAAAGGGAAAGAAAGAAGCATTTGATTATGATGGTGAGTTCAACCTTCTTTTGAGTGATTGGTGGCACCAAAGCACACATGAACAGCAGCTTGCTCTCTCCTCCATTCCTTTCAGATGGATTAATGAACCTCAGTCTCTGCTTATGAATGGAAGAGGACAATACAATTGTTCCTTGGCAGCTAATGTTATGAACACCTCCTTGTCCCAATGTAAGTTCAAAGGCAATGAAGAATGTGCACCCCAGATTTTTCATGTTCATCCAAACAAGACCTACAGAATTAGAATTGCTAGTGCAACTTCCTTAGCATCTCTCAACTTGGCCATTGGGAATCACAAATTGGTGGTGGTGGAAGCTGATGGAAACTATGTGAAACCATTTACTGTTAATGACATAGATATATATTCTGGTGAATCCTATTCAGTCCTCCTCACAACAAATCAAGATCCAAAGAAGAACTATTGGATTTCAATTGGTGTTAGAGGAAGAAAACCTAACACTCCACAAGGGTTAACTATACTAAACTACAAAACAATATCTGCTTCAATTTTCCCCACTTCTCCACCACCAATCACACCTCAATGGGATGATTACAATCATAGCAAGACATTCACATACAAAATTATTGCACGAAAGGGAACCAGAAAACCTCCTCAACACTATGATCGTAGGCTTCTCCTTCTTAATACACAAAACCTTGTCGGTGGATACACTAAATGGGCCATCAACAATGTCTCCTTAGTATTGCCATCAACTCCATACCTAGGCTCTATTAAGTTTAATGTCAATGGTTCCTTTGACACAAAAAGCCCCCCAGACACTTTCTCAGAGGATCACGACATCTACAAGCCTCCCTTGAATCCTAATTCAAACATTGGTAATGGGGTTTACATGTTCCAGTTAAACCAAGTGGTGGATGTGATACTCCAAAATGCTAATGTAATGAAGGGGCAAAATAGTGAGATTCACCCTTGGCATTTGCATGGGCATAACTTTTGGGTTTTGGGGTATGGAGATGGGAAGTTTCAACAGGGTGATGAGAGGAAATTCAACTTGAAGAACCCACCATTGAGGAACACTGCAGTGATATTCCCGTATGGTTGGACTGCTTTGAGGTTCAAGGCAGATAATCCTGGTGTTTGGGCCTTCCATTGTCACATTCAACCTCATTTGTACATGGGAATGGGTGTAATTTTTGCTGAGGCTGTTCTAAATGTTAAGAAAATACCTCGTGAAGCTCTAGCATGTGGCCTTCTAAGGAAGGTGTTAATAAATAAAAAGCACAACTAA 1740 0.4132 MSKSNTTMSLRGVILWCVWLCLLQLSLGAVRHYKLDVKYRYGEPDCKEQVVMGINGQFPGPTIRAKAGDTLHIAVTNKLVTEGTVIHWHGIRQYGTPWADGTASISQCAISPGETFHYRFTVDKAGTYFYHGHYGMQRTAGLYGFLIVDLAKGKKEAFDYDGEFNLLLSDWWHQSTHEQQLALSSIPFRWINEPQSLLMNGRGQYNCSLAANVMNTSLSQCKFKGNEECAPQIFHVHPNKTYRIRIASATSLASLNLAIGNHKLVVVEADGNYVKPFTVNDIDIYSGESYSVLLTTNQDPKKNYWISIGVRGRKPNTPQGLTILNYKTISASIFPTSPPPITPQWDDYNHSKTFTYKIIARKGTRKPPQHYDRRLLLLNTQNLVGGYTKWAINNVSLVLPSTPYLGSIKFNVNGSFDTKSPPDTFSEDHDIYKPPLNPNSNIGNGVYMFQLNQVVDVILQNANVMKGQNSEIHPWHLHGHNFWVLGYGDGKFQQGDERKFNLKNPPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIQPHLYMGMGVIFAEAVLNVKKIPREALACGLLRKVLINKKHN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2141 579 Gene3D - 23 149 IPR008972 -
Pvu8g2141 579 Pfam Multicopper oxidase 37 149 IPR011707 GO:0005507
Pvu8g2141 579 Pfam Multicopper oxidase 442 552 IPR011706 GO:0005507|GO:0016491
Pvu8g2141 579 SUPERFAMILY Cupredoxins 158 359 IPR008972 -
Pvu8g2141 579 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
Pvu8g2141 579 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Pvu8g2141 579 Gene3D - 158 364 IPR008972 -
Pvu8g2141 579 PANTHER MULTI-COPPER OXIDASE 18 571 IPR045087 -
Pvu8g2141 579 SUPERFAMILY Cupredoxins 18 176 IPR008972 -
Pvu8g2141 579 Gene3D - 365 579 IPR008972 -
Pvu8g2141 579 PANTHER L-ASCORBATE OXIDASE 18 571 - -
Pvu8g2141 579 CDD CuRO_3_AAO 372 560 IPR034267 GO:0005507
Pvu8g2141 579 Pfam Multicopper oxidase 164 327 IPR001117 -
Pvu8g2141 579 SUPERFAMILY Cupredoxins 368 566 IPR008972 -
Pvu8g2141 579 TIGRFAM ascorbase: L-ascorbate oxidase 30 567 IPR017760 GO:0005507|GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2141 Pvu-Chr8 51832060 51837970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2141 K00423 - gmx:102666289 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2141 8 51832060 51837970 Pvu8g2141 8 51832060 51837970 ECH
Pvu1g2026 1 46115528 46119418 Pvu8g2141 8 51832060 51837970 ECH
Pvu7g2415 7 47534396 47537571 Pvu8g2141 8 51832060 51837970 ECH
Pvu6g0120 6 5782362 5788641 Pvu8g2141 8 51832060 51837970 PCT