Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2415 ATGAGAGCAGGAGTTTGCAGCATACAGCTACAGGCTTTGACAGCAGAAGCTGCAACCCTAGTTAAGCAAGCTGTTACTCTTGCCACAAGAAGAGGACATGCTCAAGTGACCCCTCTTCATATTGCTACTGTCATGCTTGCTACTTCCACTGGCCTTCTCCGCAAAGCTTGCCTTCAATGCCACTCTCACCCTCTCCAATATAAGGCATTAGAACTTTGCTTCAATGTTTCCCTCAACCGTTTGCCAGCCTCCACTCCAAGCCCTCTTTTGAGCCCTTCATATTCCACCACTCCCTCACTCTCCAATGCCTTGGTTGCAGCCTTCAAGCGAGCTCAAGCTCACCAACGCCGTGGCTCCACTGAGAACCAGCAGCAGCCCATTTTGGCCTTGAAGATTGAGGTGGAGCAGCTCATAGTCTCTATCCTTGATGACCCTAGTATTAGCAGGGTCATGAGAGAAGCTGGCTTCTCTAGTGCCCTTGTTAAAACCAGGGTTGAACAAGCTGTTTCAATGGAAGTTTGTTCACAAGAACAAGCTTCCGAGGAAAACACCACCAAGCTTCAAGTTCTTGGTGGTAGGAACATGTCCCCACCAAGATCTTTTACTCAATTTGGGGGCTCATTCATCAAATCTATGGACCATGTTAGTGATGAAGTTGCTGGTGTAGATGATGTAACTAGTGCTTTGAATGCACTTGTGAGCAAGAGGAGAAACACAGTAATTGTTGGGGAGAGTCTTGCTAGTGCTGAGGGAGTAGCTAGGGGAGTGATGCAAAGGTTGGAGAGAGGGAATCCTCAAGGAGAGTTGAGGTTTGTGCAATTTGTGAGTCTTCCTCTTTTCTCCTTCAGGAACATTAGCAAGGAGGAGGTTGAAAGGAAGCTTCTAGAGCTTAGAAGCCTAGTAAAAAGTCACGTTGGAAGAGGGTTTATTCTATACTTGGGTGATCTCAAGTGGTTGTTTGAGTTCTGGTCAAGTTATTGTGAGCAAAGAACAAACTATTACAGTTCTGTGGAGCATATGGTGATGGAGCTCAAAAAACTAGTTAGTGGAAATGGTGAGAATGGTAGATTGTGGCTTATGGGGATATCAACTTTTAGAACATACATGAAGGGCAAAGCATGTCACCCTTCTCTTGAAACTATTTGGGATCTTCACCCTTTTACCGTTCCAGTTGGTAGCCTCAGCCTGGGTTTAAATTTTGATAGTGATTTTCAAGTTCAGGAGAGAAGCAAGGCAACATTCAAGGACGAATCTTTTGAAGAACGGGCCAAAGTGCGCAAACATTTAACTTGCTGCAGAGACTGCGCATTGAATTTTGAAAAAGAAGCTAAAAGCACCGTCAGTACTATAAGCAAGAGAGATTGCACTACCACCTTGCCAACATGGCTCAAAAATTGCAAGGAAGAGAGAAGTCACGTGATGGATGATCAGGAAAATGCTAAGCTTAAAGATATCTGCAAGAAATGGAACTCATTTTGCAGTTCAGCACATGGTTATCCTTCCAATCTTGAGAAACAATTTTTGTTCATTTCATCCGCACCTTCATCCCCTACTTCAGTCTCTTCACATGAAAGAAAGTCTAGCTTGAATCTCACCCACCTAAATTGGCCAGTCATTTCTGAACCAAAAGAAGTACCCAAAGAATGTGAGTTATACACTGAGACTAGTGTTAGTGATGAGTGTTATGAAGGAAACTTGATAATGTTCATGCCAGAGAGAAACATCCCTAAGCCAGATCTTTTGTCTAATCCAAATTCTAGCCCCAATTCTGCTTCTTCAAGTGAGGCAGCGGAAGGTTTGGACAGCACTCAAATGTTCAAGGAGCATAATGAAGAGAATCTAATGATTCTCAGTGATGCATTGCAGAAAAAGGTTCCACAAAATAAAGAAATGGCTAAGGAGATTGCTAGCACTTTGCTTCTTTGCAGGTCAGGAATGAAAAAAGGAGAGAATCACTTGGTGAAGAGAGAAGATAGACAAGAAACTTGGTTTTTCTTTCTAGGTATAGATTCTGAAGCAAAAGAAATGGTCTCAAAAGAGGTAGCTAAAGTTGTGTTTGGCTCTTACAGTAACTTTGTCTCCATTGGTGTAAGCAGTTTCTCCACCTCAAGAGGTGGTGATTCCACGAATGATGCGTCCAAAAATAAAAGAGCAAGAGATGAGTTCGGTGGCAGTTATCTTCAGAGATTTGGGGAAGCTGTGAATGAGAATCCTCATAGGGTGTTCTTCATGGAAGATTTGGAGCAAGTTGATCACTTTTCAAAAAAGGGTGTTAAGAAAGCAATTCAAAATGGCACTATAACACTTCCCGGGGGTGAATCTGTGCCTCTCAAGGATGCAGTTGTCATTTTCAGCTGTCAAAACTTTAGTTCAGCCTCTTCTCCTGCAACAACTACTTCTCCATCTTCTGATGAAAACATGGAGAAAGAGAATATTAATAACTCAGAAGACAAAATTCCATACCTTTCTTTGGATCTGAACATGGCCATTGAAGCTGATGCGCAGAAAACTGTGCATTTAGATGAAGTCACTGCTGAGATCCTGGAGTTAGTTGACAAGCAAATTAAGTTTCAAGTATGA 2580 0.4264 MRAGVCSIQLQALTAEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKACLQCHSHPLQYKALELCFNVSLNRLPASTPSPLLSPSYSTTPSLSNALVAAFKRAQAHQRRGSTENQQQPILALKIEVEQLIVSILDDPSISRVMREAGFSSALVKTRVEQAVSMEVCSQEQASEENTTKLQVLGGRNMSPPRSFTQFGGSFIKSMDHVSDEVAGVDDVTSALNALVSKRRNTVIVGESLASAEGVARGVMQRLERGNPQGELRFVQFVSLPLFSFRNISKEEVERKLLELRSLVKSHVGRGFILYLGDLKWLFEFWSSYCEQRTNYYSSVEHMVMELKKLVSGNGENGRLWLMGISTFRTYMKGKACHPSLETIWDLHPFTVPVGSLSLGLNFDSDFQVQERSKATFKDESFEERAKVRKHLTCCRDCALNFEKEAKSTVSTISKRDCTTTLPTWLKNCKEERSHVMDDQENAKLKDICKKWNSFCSSAHGYPSNLEKQFLFISSAPSSPTSVSSHERKSSLNLTHLNWPVISEPKEVPKECELYTETSVSDECYEGNLIMFMPERNIPKPDLLSNPNSSPNSASSSEAAEGLDSTQMFKEHNEENLMILSDALQKKVPQNKEMAKEIASTLLLCRSGMKKGENHLVKREDRQETWFFFLGIDSEAKEMVSKEVAKVVFGSYSNFVSIGVSSFSTSRGGDSTNDASKNKRARDEFGGSYLQRFGEAVNENPHRVFFMEDLEQVDHFSKKGVKKAIQNGTITLPGGESVPLKDAVVIFSCQNFSSASSPATTTSPSSDENMEKENINNSEDKIPYLSLDLNMAIEADAQKTVHLDEVTAEILELVDKQIKFQV* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2415 859 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 859 - -
Pvu7g2415 859 MobiDBLite consensus disorder prediction 579 600 - -
Pvu7g2415 859 Gene3D - 592 857 IPR027417 -
Pvu7g2415 859 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 859 - -
Pvu7g2415 859 MobiDBLite consensus disorder prediction 791 810 - -
Pvu7g2415 859 MobiDBLite consensus disorder prediction 577 601 - -
Pvu7g2415 859 SUPERFAMILY Double Clp-N motif 13 165 IPR036628 -
Pvu7g2415 859 MobiDBLite consensus disorder prediction 791 808 - -
Pvu7g2415 859 Gene3D - 9 171 IPR036628 -
Pvu7g2415 859 ProSiteProfiles Clp repeat (R) domain profile. 10 172 IPR004176 -
Pvu7g2415 859 Pfam Clp amino terminal domain, pathogenicity island component 132 169 IPR004176 -
Pvu7g2415 859 Pfam Clp amino terminal domain, pathogenicity island component 24 55 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2415 Pvu-Chr7 47534396 47537571 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2415 - - gmx:100775479 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2415 7 47534396 47537571 Pvu7g2415 7 47534396 47537571 ECH
Pvu7g2415 7 47534396 47537571 Pvu8g2141 8 51832060 51837970 ECH