Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0120 ATGGGGTTGAAAGCAGTTTTGGTTTGGTGCATATGGTTGGGGCTGATACAATATTCAGTTGGAGGAAGGGTGAGGCACTACAGGTTTGATGTGGAGTACATGATGAGAAAGCCAGATTGTTTGGAACACGTTGTGATGGGAATCAATGGGCAGTTTCCAGGGCCAACTATTAGGGCTGAAGTTGGTGACACTCTTCACATTGCTCTCACCAACAAGCTTTTCACTGAGGGAACTGTTATTCACTGGCATGGAATCAGACAGGTTGGAACTCCTTGGGCAGATGGAACTGCTGCTATCTCACAGTGTGCTATAAATCCAGGAGAAACTTTTCACTACAGGTTTATAGTTGAGAGGCCTGGAACATATTTTTATCACGGACACCATGGAATGCAAAGATCAGCAGGGTTGTATGGTTCACTGATAGTAGATTTGCCAAAGGGACAAAAAGAAGCATTTCATTATGATGGTGAGTTCAACCTCCTTCTCAGTGATTTCTGGCACACCAGTTCACATGAACAAGAAGTTGGTCTCTCTTCCATACCATTAAAATGGATTGGTGAACCTCAGAGTCTGCTGATCAATGGAAGGGGACAATTCAATTGTTCTCTGGCAGCTAAATTCATAAACACCACTCTTCCCGAGTGCCAATTTAAAGGTGGTGAAGAATGTGCACCTCAAATTCTTCATGTAGAGCCAAACAAGACCTACAGGATTAGGGTTGCCAGCACCACTTCCCTTGCTGCACTCAACTTAGCCATTTCGAATCACAAACTTGTTGTTGTGGAAGCTGATGGAAACTATGTTACACCATTTGTGATTGATGATATGGATATTTACTCTGGTGAGACCTACTCAGTTCTCCTTCGCACAGATCAAGATCCAAAGAAAAATTATTGGCTTTCAATTGGGGTTAGAGGAAGAAAACCTAACACCACACAAGGTCTAACCATTCTAAACTACAAGACAATTTCTGCATCAGTTTTTCCAACTTCTCCACCACCCCTCACACCCCTTTGGAATGATTTTGAACGTAGCAAAGCATTCACCAAGAAAATCATTGCCAAGATGGGAACCCCACAACCTCCAAAACGTTCTGATCGTACAATTTTCCTCCTCAACACCCAAAATCGCGTTGATGGGTTCACCAAATGGTCCATTAACAACGTGTCCCTAACATTGCCACCAACCCCTTACTTGGGCTCCATCAAGTTCAAACTAAACGATGCATTTGATCAAACACCTCCACCTGTGACCTTCCCTCAAGACTATGACATTTTCAACCCTCCTGTGAACCCTAACTCAACCATTGGCAATGGGGTGTACAAGTTCAACCTTAACGAGGTTGTTGATGTGATATTGCAAAATGCAAACCAATTGAGTGGAAATGGTAGTGAGATTCACCCTTGGCACTTGCATGGGCATGACTTTTGGGTTTTGGGGTATGGAGAAGGCAAATTCAAACAAGGTGATGAGAAGAAATTCAACTTGACACATGCACCATTGAGGAACACAGCAGTGATATTTCCATATGGTTGGACTGCATTGAGGTTTAAGGCAGATAACCCAGGAGTTTGGGCCTTCCATTGTCACATTGAACCACATTTGCACATGGGAATGGGTGTGATTTTTGCTGAGGGTGTTCACAAAGTTGGAAAAATCCCAAGAGAAGCCCTTACTTGTGGGCTTACCGGGAAGAAGCTAGTAGAAAATGGACACTAA 1719 0.434 MGLKAVLVWCIWLGLIQYSVGGRVRHYRFDVEYMMRKPDCLEHVVMGINGQFPGPTIRAEVGDTLHIALTNKLFTEGTVIHWHGIRQVGTPWADGTAAISQCAINPGETFHYRFIVERPGTYFYHGHHGMQRSAGLYGSLIVDLPKGQKEAFHYDGEFNLLLSDFWHTSSHEQEVGLSSIPLKWIGEPQSLLINGRGQFNCSLAAKFINTTLPECQFKGGEECAPQILHVEPNKTYRIRVASTTSLAALNLAISNHKLVVVEADGNYVTPFVIDDMDIYSGETYSVLLRTDQDPKKNYWLSIGVRGRKPNTTQGLTILNYKTISASVFPTSPPPLTPLWNDFERSKAFTKKIIAKMGTPQPPKRSDRTIFLLNTQNRVDGFTKWSINNVSLTLPPTPYLGSIKFKLNDAFDQTPPPVTFPQDYDIFNPPVNPNSTIGNGVYKFNLNEVVDVILQNANQLSGNGSEIHPWHLHGHDFWVLGYGEGKFKQGDEKKFNLTHAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEGVHKVGKIPREALTCGLTGKKLVENGH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0120 572 Gene3D - 152 358 IPR008972 -
Pvu6g0120 572 Gene3D - 16 145 IPR008972 -
Pvu6g0120 572 SUPERFAMILY Cupredoxins 152 356 IPR008972 -
Pvu6g0120 572 SUPERFAMILY Cupredoxins 362 560 IPR008972 -
Pvu6g0120 572 Pfam Multicopper oxidase 437 546 IPR011706 GO:0005507|GO:0016491
Pvu6g0120 572 PANTHER PLANT L-ASCORBATE OXIDASE 10 564 - -
Pvu6g0120 572 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Pvu6g0120 572 Pfam Multicopper oxidase 158 321 IPR001117 -
Pvu6g0120 572 SUPERFAMILY Cupredoxins 19 171 IPR008972 -
Pvu6g0120 572 Gene3D - 359 570 IPR008972 -
Pvu6g0120 572 TIGRFAM ascorbase: L-ascorbate oxidase 24 563 IPR017760 GO:0005507|GO:0005576
Pvu6g0120 572 CDD CuRO_3_AAO 365 554 IPR034267 GO:0005507
Pvu6g0120 572 PANTHER MULTI-COPPER OXIDASE 10 564 IPR045087 -
Pvu6g0120 572 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Pvu6g0120 572 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0120 Pvu-Chr6 5782362 5788641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0120 K00423 - gmx:547647 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0120 6 5782362 5788641 Pvu6g0120 6 5782362 5788641 ECH
Pvu6g0120 6 5782362 5788641 Pvu8g2141 8 51832060 51837970 PCT