Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1076 ATGATGTCCCACACAGAGGAGAGAGCCACACTCACGTGGCGCAAAATCCCTCACAATCCCAAATACGATGTCGTTCGCCCCCGCGTCTGTCACGCCGCAGCCACCACCCACTCCCAATTCGCCTCTGTCTCCGTCGCCCAATCCAAACTGCACCAAGACTTCATGCCCACGCCCTCCCAGCTCCTCAAGCACCCCCTTGCCGCCTTCGCCTTCGTCCCCCGCGACGCCTCTCTCTTCTTCGCTGGAGCCATCGCCGGCGCCGCCGCCAAGACCGTCACCGCGCCGCTCGACCGTATCAAGCTCCTCATGCAGACTCAAAGCGTGCGGGTTGGGCAAGATAGTGCTAAGAAGGCAATGAGTTTCGTTGAGGCCATAGCAGCTGTAGGGAAAGAAGAAGGCATTAAAGGTTACTGGAAGGGCAACCTCCCCCAGGTGATTCGGGTCGTACCTTACACTGCTGTCCAGCTCTTTGCTTATGAAATTTATAAGAAAATATTCAGGGGAGAGAATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCAGGAATGACATCCACTTTCATAACTTACCCATTAGATGTTCTAAGATTGCGATTAGCTGTTGAACCGGGTTACCGTACCATGTCAGAGGTTGCCTTGAGCATGGTGAGGGAGGAAGGATTTGCATCTTTCTATCGAGGCCTAGGTCCTTCTCTTATTGCAATAGCTCCTTATATTGCAGTAAACTTTTGTGTTTTTGACTTATTAAAGAAGTCATTGCCTGAGAAATACCAAAAGAGAACTGAAACATCTATACTCACAGCTGTCCTTTCGGCATCTCTTGCCACTCTTACATGCTATCCTCTGGACACTGTTCGAAGACAGATGCAATTGAAGGGCACACCTTATAATACAGTATTAGATGCTCTTTCAGGTATTGTGGCACGAGATGGAATTGCTGGATTGTATCGTGGATTTGTGCCCAATGCTCTAAAATCCCTTCCTAACAGCAGCATCAAGCTTACCATATATGACATTGTTAAGCGCCTTATTGCTGCTAGTGAGAAAGAATTTCAATCAATTACAGAGGAAAATCGCATCAAGCACAAGAACACTAACAAGCAATGA 1119 0.487 MMSHTEERATLTWRKIPHNPKYDVVRPRVCHAAATTHSQFASVSVAQSKLHQDFMPTPSQLLKHPLAAFAFVPRDASLFFAGAIAGAAAKTVTAPLDRIKLLMQTQSVRVGQDSAKKAMSFVEAIAAVGKEEGIKGYWKGNLPQVIRVVPYTAVQLFAYEIYKKIFRGENGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMVREEGFASFYRGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTAVLSASLATLTCYPLDTVRRQMQLKGTPYNTVLDALSGIVARDGIAGLYRGFVPNALKSLPNSSIKLTIYDIVKRLIAASEKEFQSITEENRIKHKNTNKQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1076 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 263 347 IPR018108 -
Pvu8g1076 372 PANTHER SOLUTE CARRIER FAMILY 25 8 361 - -
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 78 91 IPR002067 GO:0055085
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 91 105 IPR002067 GO:0055085
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 140 160 IPR002067 GO:0055085
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 188 206 IPR002067 GO:0055085
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Pvu8g1076 372 PRINTS Mitochondrial carrier protein signature 272 294 IPR002067 GO:0055085
Pvu8g1076 372 SUPERFAMILY Mitochondrial carrier 78 343 IPR023395 -
Pvu8g1076 372 Gene3D Mitochondrial carrier domain 76 357 IPR023395 -
Pvu8g1076 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 173 256 IPR018108 -
Pvu8g1076 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 165 IPR018108 -
Pvu8g1076 372 Pfam Mitochondrial carrier protein 78 168 IPR018108 -
Pvu8g1076 372 Pfam Mitochondrial carrier protein 268 349 IPR018108 -
Pvu8g1076 372 Pfam Mitochondrial carrier protein 172 259 IPR018108 -
Pvu8g1076 372 PANTHER ADP/ATP CARRIER PROTEIN 8 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1076 Pvu-Chr8 11927449 11932217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1076 40 365 Organic Solute Cotransporters AT5G01500 76.074 9.86e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1076 K14684 - gmx:100778912 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1076 8 11927449 11932217 Pvu8g1076 8 11927449 11932217 ECH
Pvu8g1076 8 11927449 11932217 Pvu10g0121 10 1828429 1831828 PCT
Pvu10g0019 10 517029 518989 Pvu8g1076 8 11927449 11932217 PCT