Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0019 GCTATAAATGTTATAGGGAAGGAAGAAGGCATTAAAGGTTATTGGAAGGGCAATCTCCCCCAGGTGATCCGAGTTATACCTTACAGTGCAGTCCAGCTTTTTTCTTACGAATTTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATCACCTACCCGTTAGATGTTCTAAGATTACGTTTAGCTGTTGAACCTGGTTATCGAACAATGTCACAGGTTGCCTTGAGCATGCTAAGGGAGGAAGGATTTGCATCTTTTTACTATGGCCTTGGGCCTTCTCTCATTGGAATTGCTCCATATATTGCAGTGAACTTCTGTGTGTTTGATTTATTAAAGAAGTCATTGCCAGAGAAATATCAGAAGAGAACTGAAACCTCTTTACTCACTGCTGTTATTTCAGCATCACTTGCCACAATTACATGCTATCCTCTGGACACGGTGCGAAGACAAATGCAATTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCAAGGGATGGAGTTATTGGCCTGTATCGGGGATTTGTGCCAAATGCTTTGAAAAACCTACCAAATAGCAGCATCAGGCTTACTACATATGACATTTTCAAACGCCTAATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTACTGAGGAAAACCGCAACAATCAAAAGAAACCCCAATGA 744 0.4099 AINVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFSYEFYKKIFKGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSQVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVISASLATITCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIFKRLIAASEKEFQTITEENRNNQKKPQ* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0019 247 ProSiteProfiles Solute carrier (Solcar) repeat profile. 140 224 IPR018108 -
Pvu10g0019 247 ProSiteProfiles Solute carrier (Solcar) repeat profile. 50 133 IPR018108 -
Pvu10g0019 247 Pfam Mitochondrial carrier protein 4 45 IPR018108 -
Pvu10g0019 247 Pfam Mitochondrial carrier protein 144 226 IPR018108 -
Pvu10g0019 247 Pfam Mitochondrial carrier protein 49 136 IPR018108 -
Pvu10g0019 247 PANTHER SOLUTE CARRIER FAMILY 25 1 237 - -
Pvu10g0019 247 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 42 IPR018108 -
Pvu10g0019 247 Gene3D Mitochondrial carrier domain 1 225 IPR023395 -
Pvu10g0019 247 PRINTS Mitochondrial carrier protein signature 17 37 IPR002067 GO:0055085
Pvu10g0019 247 PRINTS Mitochondrial carrier protein signature 65 83 IPR002067 GO:0055085
Pvu10g0019 247 PRINTS Mitochondrial carrier protein signature 106 124 IPR002067 GO:0055085
Pvu10g0019 247 PRINTS Mitochondrial carrier protein signature 149 171 IPR002067 GO:0055085
Pvu10g0019 247 PANTHER ADP/ATP CARRIER PROTEIN 1 237 - -
Pvu10g0019 247 SUPERFAMILY Mitochondrial carrier 3 220 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0019 Pvu-Chr10 517029 518989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0019 1 244 Organic Solute Cotransporters AT3G51870 76.639 1.85e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0019 K14684 - gmx:100796878 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0019 10 517029 518989 Pvu8g1076 8 11927449 11932217 PCT