Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0121 ATGGAAGCGCGCGTGGGGATGGTGATGGAAGGGGGGCAGAGAACCCTCAAGGCCGACGGCGTCGCCGCCAAGTTTCTGGCGCCGAACAGTCAAGGCACGCTGCATCAGCTTCTCGCCGGCGGCATCGCCGGCGCGTTTAGCAAAACCTGCACTGCCCCCCTTGCGCGTCTCACTATCCTGTTTCAGGTGCAAGGTATGCATTCTGAGGTGGCAGCTTTGAGCAATCCTAGTATATGGTGTGAGGCATCACGTATTATCAATGAAGAAGGGTTTAGAGCATTTTGGAAAGGCAATATGGTGACCATTGCTCATCGTCTTCCCTATTCTGCAGTCAGCTTCTATGCTTATGAACGCTACAAGAATCAACTACACTCACTGATGGGAGAGAATGTTAGGGGAAATTCAAGTGCAAACCCCCTTGTGCACTTTGTGGGTGGTGGTTTGGCAGGTATAACAGCTGCTTCTGCCACATATCCTTTGGATCTTGTGAGGACACGACTTGCAGCACAGAGAAGTACCATGTACTACCAAGGCATCTCACATGCTTTCAGTACCATCTGTAGAGATGAAGGTTTCTTGGGTCTGTATAAGGGGCTTGGAGCAACATTGTTGGGTGTTGGGCCCAGTATAGCTATTAGTTTTTCTGTTTATGAGTGGTTACGTTCTGTATGGCAAACACAAAGGCCCAATGATTCTACTGCTGTGGTTGGTCTTGCCTGTGGCAGTCTGTCAGGAATTGCATCATCAACAGCAACATTCCCTTTGGATCTTGTTAGGCGTAGGATGCAATTAGAGGGTGCTGGTGGTCGAGCTCGTGTCTATAACACTGGCTTGTTTGGTGCATTTGGGCGGATAGTTCAAACCGAAGGGGTGCGAGGTTTGTACAGAGGAATTCTGCCTGAGTACTACAAGGTTGTTCCCAGTGTTGGCATTGTCTTTATGACATATGAAACACTGAAAATGCTTCTATCAGGCATTCCTAGTTATTAG 990 0.4879 MEARVGMVMEGGQRTLKADGVAAKFLAPNSQGTLHQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSEVAALSNPSIWCEASRIINEEGFRAFWKGNMVTIAHRLPYSAVSFYAYERYKNQLHSLMGENVRGNSSANPLVHFVGGGLAGITAASATYPLDLVRTRLAAQRSTMYYQGISHAFSTICRDEGFLGLYKGLGATLLGVGPSIAISFSVYEWLRSVWQTQRPNDSTAVVGLACGSLSGIASSTATFPLDLVRRRMQLEGAGGRARVYNTGLFGAFGRIVQTEGVRGLYRGILPEYYKVVPSVGIVFMTYETLKMLLSGIPSY* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0121 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 322 IPR018108 -
Pvu10g0121 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 223 IPR018108 -
Pvu10g0121 329 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 328 - -
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 152 170 IPR002067 GO:0055085
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Pvu10g0121 329 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Pvu10g0121 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 122 IPR018108 -
Pvu10g0121 329 PANTHER SOLUTE CARRIER FAMILY 25 1 328 - -
Pvu10g0121 329 Gene3D Mitochondrial carrier domain 28 325 IPR023395 -
Pvu10g0121 329 SUPERFAMILY Mitochondrial carrier 32 319 IPR023395 -
Pvu10g0121 329 Pfam Mitochondrial carrier protein 32 123 IPR018108 -
Pvu10g0121 329 Pfam Mitochondrial carrier protein 137 226 IPR018108 -
Pvu10g0121 329 Pfam Mitochondrial carrier protein 233 324 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0121 Pvu-Chr10 1828429 1831828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0121 1 328 Organic Solute Cotransporters AT2G37890 65.373 1.24e-159 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0121 - K14684 gmx:100777563 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1076 8 11927449 11932217 Pvu10g0121 10 1828429 1831828 PCT