Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1058 ATGATGTTGCAGAAGAAGGTGAACTATGGTTTTAATGGCTACAAAGGGCCTGCAATTCCTAAAGCTTCAAGGTCAATTAGGGGGAGGGGCACAATCAGGAAGAAACCTGAAAATAACCAAATACAAGCTTTTGAAATATTGGCTAATGTAGCTGGCAACTTCTTGCAAGAGAGTGAGAATTCCGGTCTTGACAATGTAGCGCCTACAAAAGATCCTCAAACTTTCTCTAGTGCTAACATAAAGGATAAGCTTGAGGATGAAGGTGGATCATTTAAGAAGGACCTATTTGAGCATGGAAATTGCAGTGAAATTGTCTCTGCCTGTGTCCCTAGTAGGCAAGGGAAACATGAGAACCTTAGAGTCATGGACAATTCATCTTTTCCTGGAAACCATCTTGAAGGCCAAGGCCAAAATATCCTTGAAAGGGAAGATGAAAGGGTTAAAAGAAGAAGAGTAAATGAGAAAAACACCCACAATAAAGGTTGCTTTGATGGGCTAATAGAACCAAGCTACAAAGTATCTAAAGATTGCAGCTCAGAAAATAATGTGGCAAAGTCGTCATTGGAAGGCCATAGGCATCTTGATTCCTTTCCCAACACTTCCAGTGGTAGGAAATTAGTTAGAGATGATGATGAAAACTTAGTTAACTGCACCCAACTGAACTCCAGGTATAAGATATCTACCACACCACCAGATATGCCAAAATTGAAATATGCAAGTCCTCTTATGAGTGATGAGAACAATAGTAGGGACAATTCTGAACTTGAAAATTTACAAAGGATGTATCCATTTAAGAAGAGGAAGTTCTTCAACCAGACCTCATCATCCACTTCTGATAGGGGGTCTCAGTGTCAAGGCATGTTTGATTCTTCTGATACCACCAGGGTCAACGACACAAATCATGCAATTGAAGAATCATCCTCTATAGTTGGTCAACAAGTGCATTCAGGGTCCAAGGGTTGTAATGTGAAGCTCAGCATAAAATCCTTTAAAGTTCCAGAACTTTTCATTAACATACCTGAAACTGCAACGATTGGTTCATTGAAGAGGACAGTAATGGAGGCTGTGACAAGTATACTCGGAGATGAACTACATGTAGGCATCCTTCTTCAGGGAAAGAAAGTACGAGATGATAGCAAAACTCTAATCCAAACAGGAATATCTCAAGATGACAAACGTCATAGATTAGGATTCATGTTGGAGCCAAGACATAGTTCAAACTCTCCATCTTCATGCAATGATAACCCTTGTTTTCTAAAAACTGGTTCGCAGCAAAAATTATCCAAGCAATCAACATCTTTACTGTTACAACAAGGAACAGTGAACGTATCCCAAGAACGTTCTATGATAAAAGTTGAAAGATGTGTGGAGGGTGATCTTAATGTGGTCTCCTCTCCAACAGATACTTATGCTAACAATAACATGTCAAAATGTCGCACTCTGGTGGCAGTTCCGGCCATTAACATGGAGGCATTAGCTGTGGTTCCATTTCGTCGCAAATCTGGGAATCCTGACTTTGCACAACGCCGAATTAGAAGGCCATTCTCGGTTCTAGAAGTAGAAGCATTGGTTCAGGCTGTTGAAAAACTTGGAACTGGAAGGTGGCGTGATGTCAAACAACGTGCTTTTGACCATGCAAAACATCGAACTTACGTTGATTTGAAG 1665 0.4048 MMLQKKVNYGFNGYKGPAIPKASRSIRGRGTIRKKPENNQIQAFEILANVAGNFLQESENSGLDNVAPTKDPQTFSSANIKDKLEDEGGSFKKDLFEHGNCSEIVSACVPSRQGKHENLRVMDNSSFPGNHLEGQGQNILEREDERVKRRRVNEKNTHNKGCFDGLIEPSYKVSKDCSSENNVAKSSLEGHRHLDSFPNTSSGRKLVRDDDENLVNCTQLNSRYKISTTPPDMPKLKYASPLMSDENNSRDNSELENLQRMYPFKKRKFFNQTSSSTSDRGSQCQGMFDSSDTTRVNDTNHAIEESSSIVGQQVHSGSKGCNVKLSIKSFKVPELFINIPETATIGSLKRTVMEAVTSILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHSSNSPSSCNDNPCFLKTGSQQKLSKQSTSLLLQQGTVNVSQERSMIKVERCVEGDLNVVSSPTDTYANNNMSKCRTLVAVPAINMEALAVVPFRRKSGNPDFAQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1058 555 CDD SANT_TRF 513 555 - -
Pvu8g1058 555 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 555 IPR031105 -
Pvu8g1058 555 SUPERFAMILY Homeodomain-like 509 555 IPR009057 -
Pvu8g1058 555 MobiDBLite consensus disorder prediction 189 210 - -
Pvu8g1058 555 MobiDBLite consensus disorder prediction 61 79 - -
Pvu8g1058 555 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 555 - -
Pvu8g1058 555 SUPERFAMILY Ubiquitin-like 318 411 IPR029071 -
Pvu8g1058 555 Gene3D - 501 555 - -
Pvu8g1058 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 507 555 IPR017930 -
Pvu8g1058 555 MobiDBLite consensus disorder prediction 61 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1058 Pvu-Chr8 11540862 11543687 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1058 - - vun:114184366 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1058 8 11540862 11543687 Pvu1g2405 1 49362238 49367908 ECH
Pvu8g1058 8 11540862 11543687 Pvu8g1058 8 11540862 11543687 ECH
Pvu8g1058 8 11540862 11543687 Pvu5g1496 5 37338890 37344782 ECH