Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0824 ATGGAGAGAAGAAGGTTTAGCTATGAGGTGCTGGTGTTTTTGCTGACCCTTTTGCTCTTCTCATTGACTTGTGCCACTGCTTCATCATCAGACCCAACACAACTCCATGACCATGTGGAGCAACCCAGGAGGAATCTTCTTGCTAATGGCCTTGCTAAAACTCCTCCAATGGGGTGGAACAGTTGGAATCATTTTTCTTGTCAAATTAACGAAAATATCATCAAAGAAACTGCTGATGCCCTTGTTTCTACTGGTCTTTCTAAGCTTGGATACAGATATGTCAATATAGATGATTGTTGGGCTGAATTAAACCGGGATGCTAGTGGTAATCTGGTAGCAAAAAAATCAACATTTCCTTCTGGAATCAAAGCTCTTGCAGATTATGTTCACAGAAAAGGTCTTAAACTTGGAATTTATTCAGATGCTGGGTATTTAACTTGTAGCAAACAGATGCCTGGTTCTCTTGGTCATGAATTTCAAGATGCCAAGACTTTTGCATCATGGGGTATTGATTATTTGAAGTATGATAACTGTAACAATGATGAATCAAAACCAACTGATAGATACCCTGTTATGACTCGGGCTTTATCGATGGCTCGTCGTCCAATCTTCTTCTCACTGTGTGAATGGGGAGACTTGCACCCTGCTTTATGGGGTGCTAAAGTGGGAAACAGCTGGAGAACTACCAATGACATTAATGATTCATGGGAAAGCATGATTTCAAGGGCAGACATGAACGAAGTTTATGCTGATTATGCAAGACCTGGTGGTTGGAATGATCCTGACATGCTTGAGGTGGGAAATGGAGGGATGACAAAGAATGAATATATTGTTCACTTCAGTTTATGGGCCCTTTCCAAGGCTCCTCTTCTTCTTGGCTGTGATGTTAGAAATATGACTAAAGAGACTGTGGAGATTGTAACAAATAAGGAAGTTATTGCAGTTAACCAAGATTCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATATTGAGATTTGGGCAGGTCCTCTTTCAATGTACAGGGTGGCTGTTATCTTGCTTAATCGTGGCCCTTGGAATATTTCCATTACAGCCAACTGGGATGACATTGGTATTCCATCAAAAAGTGTTGTCCAAGCAAGAGACCTTTGGGAGCACAAGACATTGGTGGAACGCTTTCAGGAAAAATTGACTGCCCAAGTTGATCCACACGGGTGTAAAATGTACGTGCTGAAGCCAGTTGCTTGA 1236 0.415 MERRRFSYEVLVFLLTLLLFSLTCATASSSDPTQLHDHVEQPRRNLLANGLAKTPPMGWNSWNHFSCQINENIIKETADALVSTGLSKLGYRYVNIDDCWAELNRDASGNLVAKKSTFPSGIKALADYVHRKGLKLGIYSDAGYLTCSKQMPGSLGHEFQDAKTFASWGIDYLKYDNCNNDESKPTDRYPVMTRALSMARRPIFFSLCEWGDLHPALWGAKVGNSWRTTNDINDSWESMISRADMNEVYADYARPGGWNDPDMLEVGNGGMTKNEYIVHFSLWALSKAPLLLGCDVRNMTKETVEIVTNKEVIAVNQDSLGVQGKKVRMEGDIEIWAGPLSMYRVAVILLNRGPWNISITANWDDIGIPSKSVVQARDLWEHKTLVERFQEKLTAQVDPHGCKMYVLKPVA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0824 411 SUPERFAMILY (Trans)glycosidases 48 318 IPR017853 -
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 49 68 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 85 100 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 161 178 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 188 206 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 253 272 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PRINTS Glycosyl hydrolase family 27 signature 274 295 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 PANTHER ALPHA-GALACTOSIDASE 13 411 - -
Pvu8g0824 411 CDD GH27 55 318 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 Pfam Alpha galactosidase A 54 318 IPR002241 GO:0004553|GO:0005975
Pvu8g0824 411 Gene3D - 321 410 IPR013780 -
Pvu8g0824 411 Gene3D Aldolase class I 47 320 IPR013785 -
Pvu8g0824 411 ProSitePatterns Alpha-galactosidase signature. 90 106 IPR000111 GO:0004553|GO:0005975
Pvu8g0824 411 Pfam Alpha galactosidase C-terminal beta sandwich domain 330 407 IPR041233 -
Pvu8g0824 411 SUPERFAMILY Glycosyl hydrolase domain 320 410 - -
Pvu8g0824 411 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 13 411 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0824 Pvu-Chr8 7789234 7792998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0824 44 407 Glycoside Hydrolase AT5G08370 68.132 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0824 K07407 - gmx:100804290 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0824 8 7789234 7792998 Pvu10g0605 10 9694964 9695372 PCT
Pvu10g0604 10 9692101 9694713 Pvu8g0824 8 7789234 7792998 PCT