Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0605 GCTCCTCTTCTTGTTGGCTGTGATCCTGGAAATATGACAGATGACACTCTAGAGATACTATCAAATGCAGAGGTTATTGCTGTTAACCAAGATCCACTTGGTATACAAGGTAAAAAGGTTAGGATGGAAGGTGCTTTAGAGATTTGGGCAGGTCCTCTATCAGAATACAGGGTGGCTGTTCTCATACTCAATAAATACGGTGATCGGCATGCAGTGATT 219 0.4247 APLLVGCDPGNMTDDTLEILSNAEVIAVNQDPLGIQGKKVRMEGALEIWAGPLSEYRVAVLILNKYGDRHAVI 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0605 73 SUPERFAMILY Glycosyl hydrolase domain 33 68 - -
Pvu10g0605 73 Pfam Alpha galactosidase A C-terminal beta sandwich domain 34 65 IPR035373 -
Pvu10g0605 73 SUPERFAMILY (Trans)glycosidases 1 32 IPR017853 -
Pvu10g0605 73 PANTHER ALPHA-GALACTOSIDASE 1 1 69 - -
Pvu10g0605 73 Gene3D Aldolase class I 1 34 IPR013785 -
Pvu10g0605 73 Gene3D - 35 72 IPR013780 -
Pvu10g0605 73 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 1 69 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0605 Pvu-Chr10 9694964 9695372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0605 1 65 Glycoside Hydrolase AT5G08370 67.692 1.75e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0605 K07407 - pvu:PHAVU_010G0584000 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0824 8 7789234 7792998 Pvu10g0605 10 9694964 9695372 PCT