Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0692 ATGGCAGCAGCAACCATAAGGTATGCAGTTGTCACAGGAGCAAACAAAGGGATAGGATTTGGGATTTGCAAGCAATTGATTTCTAATGGTATCACTGTGGTGCTAACAGCAAGGGATGAAAAAAGGGGTATTGAAGCTGTTGAAAAACTGAAAGAGTTTGGTGCGTCTGACCAAGTGGTGTTTCATCAGCTTGATGTGACTGACCCTAAAAGCATTGAATCCCTTGCAAATTTCATCAAAACCCAGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGAGTCAGTGGAACTAGTGTTGACCATGATGCTATAGCTGCTGCAGGGGAAAAACTTGGCAGTGTTGATTGGAGAAAATTCGCACATGAAACTTATGAATCTGCAGAATCAAGCATTAGAACAAATTACTATGGAGCCAAATTAATGTGTGAAGCATTTATTCCCCTTCTAGAATTGTCAGACTCACCAAGGATTGTTAATGTTTCCTCCGTCATGGGGAAGTTGGAGAAAATACCAAATGAATCGGCTAGAGGAGTCCTAAGTGATGTTGAAAGCTTAACAGAAGAAAAGGTGGAAGAAGTTTTGAATCAGTTTCTAAATGGTTTTAAAGAGGGTTCATTACAAACCAATGGGTGGCCAGATGTGCTTTCTGCATATATAGTCTCAAAAGCTGCTTTGACTGCCTACACAAGAGTCCTTGCCAAGAAGTACCCATCTTTCTGCATCAATGCTGTTTGCCCTGGCTTTGTGAAAACAGATTTAAACTTCAATATTGGCTATTTTAGTATTGAAGAAGGTGCTGAAAGTGTTGTAAGGTTGGCTCTGCTACCTAATGGAGGTCCTTCTGGTCTCTTCTTTTCTCGAAGTGAAGTGACATCAGTCTGA 885 0.4068 MAAATIRYAVVTGANKGIGFGICKQLISNGITVVLTARDEKRGIEAVEKLKEFGASDQVVFHQLDVTDPKSIESLANFIKTQFGKLDILVNNAGVSGTSVDHDAIAAAGEKLGSVDWRKFAHETYESAESSIRTNYYGAKLMCEAFIPLLELSDSPRIVNVSSVMGKLEKIPNESARGVLSDVESLTEEKVEEVLNQFLNGFKEGSLQTNGWPDVLSAYIVSKAALTAYTRVLAKKYPSFCINAVCPGFVKTDLNFNIGYFSIEEGAESVVRLALLPNGGPSGLFFSRSEVTSV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0692 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 292 - -
Pvu8g0692 294 Pfam short chain dehydrogenase 8 168 IPR002347 -
Pvu8g0692 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 292 - -
Pvu8g0692 294 CDD carb_red_PTCR-like_SDR_c 7 291 IPR045313 GO:0016616
Pvu8g0692 294 Gene3D - 4 294 - -
Pvu8g0692 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pvu8g0692 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 IPR002347 -
Pvu8g0692 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Pvu8g0692 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pvu8g0692 294 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pvu8g0692 294 PRINTS Glucose/ribitol dehydrogenase family signature 150 166 IPR002347 -
Pvu8g0692 294 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Pvu8g0692 294 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Pvu8g0692 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0692 Pvu-Chr8 6158884 6161971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0692 10 259 Acyl Lipid Metabolism Gene Families AT1G24360 22.134 2.53e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0692 K15095 - gmx:106797124 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0692 8 6158884 6161971 Pvu8g0692 8 6158884 6161971 ECH
Pvu8g0692 8 6158884 6161971 Pvu10g0994 10 34757444 34761712 PCT
Pvu10g0993 10 34733591 34735973 Pvu8g0692 8 6158884 6161971 PCT