Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0993 ATGGGAGAAGCAGCAAAAAGGTATGCAGTAGTGACAGGAGCTAACAAGGGGATAGGCTATGGAATATGCAAGAAACTGGCTTTGAATGGAGTTGTGGTGGTGCTAACAGCTAGAAATGAGAAAAGGGGTTTAGAAGCAGTGGAAAGATTGAAAGAGTTTGGCCTCTCAGACTTTGTGGTTTTTCATCAACTTGATGTCACAGACCCTTCCAGTGTTACTTCCTTAGCAGATTTCATCAAAACCAGATTTGGAAAACTTGATATATTGGTGAACAACGCAGGTGTTCCTGGGGGAAAAGTAAATGGAGAGAATTATCTTAGAAGGAAAAAGGGTGAAATATTGGATTGGAATCTAATAGTGTATCAAAATTATGAGTTAGCCAAAGAATGTGTTGAAACAGACTTCTTTGGTGCAGAAAGAGTAACTGAAGCTCTTCTTCCTCTGCTCCAACTCTCCACTTCACCAAGGATTGTCAATATTTCTGGTCAAATAGGACTACTGAAGCACATACCAAATGAGTGGGCAAGAGAAGTTTTTGGTGACATTGAGAATCTCACAAATGAGAAACTTTATGAGGTACTTAGAGAGTTTCTCAAAGATTACAAAGAAGGATCATTAGAATCCAAAAATTGGCCACCTGTGGTTTCTGGTGTCACCATGGCAAAAGCAGGTATAAATGCCTACACAAGGATGCTAGCTAAGAAGTTCCCTCATTTTTGCATAAATTGTATATGCCCTGGCTCTGTCAAAACTGATATAAACCACAACAACGGTTTGTTAAGTATTGATGAAGGTGCTGAAAATCCTGTTAGGCTAGCATTGTTGCCTGATCATGGTCCTTCTGGCCTCTTTTTCTCAATAGATCAAGTGATTCCCTTTTGA 882 0.3968 MGEAAKRYAVVTGANKGIGYGICKKLALNGVVVVLTARNEKRGLEAVERLKEFGLSDFVVFHQLDVTDPSSVTSLADFIKTRFGKLDILVNNAGVPGGKVNGENYLRRKKGEILDWNLIVYQNYELAKECVETDFFGAERVTEALLPLLQLSTSPRIVNISGQIGLLKHIPNEWAREVFGDIENLTNEKLYEVLREFLKDYKEGSLESKNWPPVVSGVTMAKAGINAYTRMLAKKFPHFCINCICPGSVKTDINHNNGLLSIDEGAENPVRLALLPDHGPSGLFFSIDQVIPF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0993 293 Gene3D - 3 293 - -
Pvu10g0993 293 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pvu10g0993 293 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pvu10g0993 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Pvu10g0993 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Pvu10g0993 293 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Pvu10g0993 293 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 293 - -
Pvu10g0993 293 Pfam short chain dehydrogenase 8 167 IPR002347 -
Pvu10g0993 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
Pvu10g0993 293 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Pvu10g0993 293 PANTHER OXIDOREDUCTASE-RELATED 1 293 - -
Pvu10g0993 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pvu10g0993 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Pvu10g0993 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0993 Pvu-Chr10 34733591 34735973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0993 10 170 Acyl Lipid Metabolism Gene Families AT1G24360 27.160 6.18e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0993 K15095 - gmx:100802560 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0993 10 34733591 34735973 Pvu10g0993 10 34733591 34735973 ECH
Pvu8g0693 8 6163278 6164748 Pvu10g0993 10 34733591 34735973 PCT
Pvu10g0993 10 34733591 34735973 Pvu8g0692 8 6158884 6161971 PCT