Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0994 ATGGGAGAGGAAGCAAAAAGGTATGCAGTGGTGACAGGAGCTAACAAGGGAATTGGTTTTGGGATATGCAAGAAACTGACTTTGAATGGAGTTGTGGTGGTGCTAACAGCTAGAAATGAGAAAAGGGGTTTGGAAGCAGTGGAAAAATTGAAAGAGTTTGGTCTCTCAGACCTTCTGGTTTTTCATCAACTTGATGTCACTGATCCTCCTAGTGTTGCTGCTTTGGCACAATTCATCAAAACTAGATTTGGAAGACTTGACATCTTGGTGAACAATGCAGGTGTTCCTGGTGGATTAGTAAATGGAGAGAATGTTCTTAGAAAGAAAAGGGGCGAAATATCAGATTGGAATTTAATAGTTCCACAAAATTATGAGTTAGCTGAAGAATGTGTTGAAATAAACTTTTTTGGTGCAGAGAGAGTAACAGAAGCTCTTCTTCCTCTCCTTCAACGATCCACTTCACCTAGAATTGTCAATGTCTCCTCTAGAAGAGGGATATTGAGGAATATACCAAATGATTGGGCAAGAGAAGTATTGAGTGACATTGAAAACCTTACAAACAAAAAAATCCATGTGGTGTTGAGGGAGTTTCTGAAAGATTACAAGGTAGGATCATTGGAATCCAAGAACTGGCCACCTGTTCTTTCTGGATACACTATGTCAAAAACAGCCTTAAATTCCTACACAAGAATGTTGGCTAAGAAGTTTCCTCGTTTTCGCATAAACTGTTTGTGCCCTGACTTTGTCAAGACTGATCTAAACCAGAATGTAGGGTTTTTAACCATTGACGAAGGTGCTGAGTGTCCTGCCAGACTAGCTTTGTTACCAGATAATGGTCCTTCTGGTCTCTTTTTCTTAAAGAATGAACTACTTTCCTTTTTCTAA 885 0.3944 MGEEAKRYAVVTGANKGIGFGICKKLTLNGVVVVLTARNEKRGLEAVEKLKEFGLSDLLVFHQLDVTDPPSVAALAQFIKTRFGRLDILVNNAGVPGGLVNGENVLRKKRGEISDWNLIVPQNYELAEECVEINFFGAERVTEALLPLLQRSTSPRIVNVSSRRGILRNIPNDWAREVLSDIENLTNKKIHVVLREFLKDYKVGSLESKNWPPVLSGYTMSKTALNSYTRMLAKKFPRFRINCLCPDFVKTDLNQNVGFLTIDEGAECPARLALLPDNGPSGLFFLKNELLSFF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0994 294 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 205 233 IPR020904 GO:0016491
Pvu10g0994 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 293 - -
Pvu10g0994 294 CDD carb_red_PTCR-like_SDR_c 7 285 IPR045313 GO:0016616
Pvu10g0994 294 Gene3D - 3 293 - -
Pvu10g0994 294 PANTHER OXIDOREDUCTASE-RELATED 1 293 - -
Pvu10g0994 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 278 IPR036291 -
Pvu10g0994 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pvu10g0994 294 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pvu10g0994 294 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Pvu10g0994 294 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Pvu10g0994 294 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Pvu10g0994 294 Pfam short chain dehydrogenase 8 166 IPR002347 -
Pvu10g0994 294 Pfam short chain dehydrogenase 203 257 IPR002347 -
Pvu10g0994 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pvu10g0994 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Pvu10g0994 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0994 Pvu-Chr10 34757444 34761712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0994 10 258 Acyl Lipid Metabolism Gene Families AT1G24360 22.619 2.09e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0994 K15095 - gmx:100802560 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0994 10 34757444 34761712 Pvu10g0994 10 34757444 34761712 ECH
Pvu8g0692 8 6158884 6161971 Pvu10g0994 10 34757444 34761712 PCT