Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2726 ATGGAGAAAGAGAACAATAAGGATAAGATGTTCGAGAAATATACATGGACGATCAAGGACTTCTCTAAATTGGGCTCTCATAAACTATTCTCTCAGAAATTTTCCATTGATGACCATTTATGGCGGATTCTCATTTTTCCAAAGGGATTAAACAATATGAATCACTTGTCAATTTATTTAGATGGTGGTGCTAGTGTTGGAAATTTGGCTGAGGGGTGGAAAAAATTTATAAATTTCAAGTTGGCTTTAATTAATCAGATCAACCACAAAATGACTAAAACGAGAGAAACTGAACACCAATTCGATGCCAAAAATATTGATTGGGGTTTCTCACAATTCATACCTTTAGATGAACTTCATAACCCTAAGAATGGATTCATAGTGAATGATACTTGCATAATTGAAGTTGAGATTTTGGTGAGTAAGTTAAAACAAGAGAATGAAGTAGATAAACCAGACAACAAGATTAAGGATATACTTACCAAACATATTGATAAACCTTTACCTAAAGAAACATTCACAACATTTGGTGAAACATTGGATTTGAAGGGTTTAGGCAAAATAGAACAACATTTTTTTCCACTATTAGAACAAGTATGTTCAAAACATCCTTCACTTCTCAACAGTCAAAAGAAGAGAACCCTTGAGTATGTTGAATGGGCATTCACAGCTTTAGGTAGAGTTCTGCATTTTCTCAAGACTAAAATGGTGAAAGATATGGATGAAGATGCATGTAATCATCTCCAAATTCTATGGGAGGAACTTGAGACATTCAAATTTGATTTGACTTGGTTGGAACCCCATGTTCAATCAGCCTTGAACATGAAAAATTACAAGGAGAGAAGTGTTGAAGTGAAAAAATTGAAGGAAAATGTGTCTTCTTTGGAGATGGAAACAAAGATGCTTGAGGAAAAAATGATAGAAACAAAGGTAAATCTTGAAATAGCAAGAAGAGAATTGACCAAAATAAGTGAAGGCTTTGTAGAATATAATTTGGATGATGGGTTAGCATATGGAGGCTAA 1023 0.3372 MEKENNKDKMFEKYTWTIKDFSKLGSHKLFSQKFSIDDHLWRILIFPKGLNNMNHLSIYLDGGASVGNLAEGWKKFINFKLALINQINHKMTKTRETEHQFDAKNIDWGFSQFIPLDELHNPKNGFIVNDTCIIEVEILVSKLKQENEVDKPDNKIKDILTKHIDKPLPKETFTTFGETLDLKGLGKIEQHFFPLLEQVCSKHPSLLNSQKKRTLEYVEWAFTALGRVLHFLKTKMVKDMDEDACNHLQILWEELETFKFDLTWLEPHVQSALNMKNYKERSVEVKKLKENVSSLEMETKMLEEKMIETKVNLEIARRELTKISEGFVEYNLDDGLAYGG* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2726 340 CDD MATH 13 138 IPR002083 GO:0005515
Pvu7g2726 340 Coils Coil 278 319 - -
Pvu7g2726 340 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 154 IPR008974 GO:0005515
Pvu7g2726 340 SUPERFAMILY TRAF domain-like 13 141 - -
Pvu7g2726 340 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 321 - -
Pvu7g2726 340 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 321 - -
Pvu7g2726 340 Pfam MATH domain 18 139 IPR002083 GO:0005515
Pvu7g2726 340 ProSiteProfiles MATH/TRAF domain profile. 11 138 IPR002083 GO:0005515
Pvu7g2726 340 SMART math_3 13 119 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2726 Pvu-Chr7 50224160 50227523 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2726 - - gmx:121172949 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2726 7 50224160 50227523 Pvu7g2407 7 47411861 47442022 ECH
Pvu7g2726 7 50224160 50227523 Pvu7g2726 7 50224160 50227523 ECH
Pvu7g2726 7 50224160 50227523 Pvu8g2176 8 52205099 52217494 ECH