Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2558 ATGGGGGGTTCTGAAGAACAACATCCTAGGCTTCCTGTTCTAGATTTCAGCACAGAAGAGTTGAAGCCAGGGAGCGATTCCTGGTTAGAAAGATGCAGAAGTGTGCGCAAAGCATTTGAAGAACATGGTTGCTTTGTAGCTGTGTATGATAAAGTTTGTGATGAGCTACGAAATGATGTATTCTGCTCCATGAAGGAGCTGTTCGATCTCTCAGTTGAAACCAAAAGAAGAAACACATATGAGGGTGCACCCTTGAAAGGCTACGTTGGACAACACCCCAAGATTCCCCTCCACCAAAGCATGGGTATAGACCAGGGAACAACCCTAGAGGGAATTCAAAGTTTTGCCCACAAAATGTGGCCAAAAGGCAATGATCAGTTTTGTAAACATATAATTGAGTATGCAAAGGTAGCAGAAGAACTGGATGGGAAGGTGGCGAGAATGATATTTGAAAGTTATGGTCTTTCAGAGTACTATGAGTCATACATAGGGTCTACAAGTTATCTCCTCAGGCTTTTGAAACACACAGCACCAGAAGAGGTTGAGCCTCAACTGGGTTTTTTGGCTCACACTGACAAGAGCTTCACCACAATTCTTCATCAAAATCATGTCAATGCACTCATGGTGGAGACAAGGAATGGTGTCTGGATTGATGTTGATTTCTCTTCAACAAATTCCTTTGTTGTCATGGCTGGTGATGCACTCATGGCTTGGAGCAATGACAGAATACAGTCCCCTAATCATAAGGTTGTGATGAAGAATGGGGAGGACACAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAAAGGAATTATGAAAGTGCCAGAAGAGCTTATTGATGAAGAACACCCAGTGCACTATAAGCCCTTTGATCATCTTGGATTACTAAACTTTTACAGTGCTAATATGAAAGCTTATTGTGGCGTTTGA 930 0.4258 MGGSEEQHPRLPVLDFSTEELKPGSDSWLERCRSVRKAFEEHGCFVAVYDKVCDELRNDVFCSMKELFDLSVETKRRNTYEGAPLKGYVGQHPKIPLHQSMGIDQGTTLEGIQSFAHKMWPKGNDQFCKHIIEYAKVAEELDGKVARMIFESYGLSEYYESYIGSTSYLLRLLKHTAPEEVEPQLGFLAHTDKSFTTILHQNHVNALMVETRNGVWIDVDFSSTNSFVVMAGDALMAWSNDRIQSPNHKVVMKNGEDTRYSLGLFAFYKGIMKVPEELIDEEHPVHYKPFDHLGLLNFYSANMKAYCGV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2558 309 Pfam 2OG-Fe(II) oxygenase superfamily 174 266 IPR044861 -
Pvu7g2558 309 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Pvu7g2558 309 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 308 - -
Pvu7g2558 309 Gene3D - 2 300 IPR027443 -
Pvu7g2558 309 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 90 IPR026992 -
Pvu7g2558 309 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 308 - -
Pvu7g2558 309 SUPERFAMILY Clavaminate synthase-like 9 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2558 Pvu-Chr7 48783784 48785936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2558 131 288 Glycosyltransferase AT5G59530 30.769 7.53e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2558 - - gmx:100809268 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1321 1 35957411 35959393 Pvu7g2558 7 48783784 48785936 PCT
Pvu7g2558 7 48783784 48785936 Pvu1g1322 1 35969998 35971616 PCT