Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1321 ATGGGATCCGAAACACAGTCTCAACTTCATGTGGTAGACTTCACTGATGAAGCCATGAAGCCTGGCACCGATGCATGGCTCTCAGCCTGCATTCTTGTCAGGACTGCACTTGAAGACAATGGTTGTTTTCTTGCACGCTATCATGGAATTGGCAAAGATCTTTGTGATTCTGTTGTATCTGCAATGGGAGACTTGTTTAGTCTCCCAGTGGAAACAAAAGCACAAAAAACCAGTGACAAACCTTTCCATAGCTACTTAGGACAAGTCTCGTGGCTTCCCTTGTATGAATCTTTGGGCATTGATAATCCTCTGACCTTACAAGGGTGCCAAAAATTCACCCACATAATGGGGTTGCAGGGGAATCATCGTTTCTGTGAAAGCGTCAATGAGTATGCTAAATTGTTGGGAGAATTAGACCATATGGCAAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGGAAGGACGCGAGTGCATGATTGAATCAAGCGATTATCTGCTTCGATGCATGAAATATAGAACAGCTGAGACGGATGAAAATGATTTGGGATTGCAATCTCACACAGACTTGACCATCGTATCCATAGTTCATCAGCTGAATAATCTGAATGGCTTGGAAATCAAACTGAAGGATGGAGAATGGATTGGGGTTGATGCCTCTTCCTCCTTGTTTGTGGTTATGGCCGGTGACGCACTCAATGTGTGGAGTAATGGTAGAATCCGACCATGTGAACACAGAGTTATCATGAATGCAACGAAAACCAGATACTCTATGGGACTATTTTCTTTTAGTGGTGAGATTTTGCAGATACCAGATGAGCTAGTGAGTGAGGAACATCCCTTGCGTTATAAATCAATATTTGACCATTATGAATACCTTCGTTACCATGAGAAAGAGAACAACAAAGACTCTTATTCTCGAATCGAAGCCTATTGTGGAATCTCATCCCTATCCTAA 960 0.426 MGSETQSQLHVVDFTDEAMKPGTDAWLSACILVRTALEDNGCFLARYHGIGKDLCDSVVSAMGDLFSLPVETKAQKTSDKPFHSYLGQVSWLPLYESLGIDNPLTLQGCQKFTHIMGLQGNHRFCESVNEYAKLLGELDHMAKRMVFESYGVDMEGRECMIESSDYLLRCMKYRTAETDENDLGLQSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASSSLFVVMAGDALNVWSNGRIRPCEHRVIMNATKTRYSMGLFSFSGEILQIPDELVSEEHPLRYKSIFDHYEYLRYHEKENNKDSYSRIEAYCGISSLS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1321 319 SUPERFAMILY Clavaminate synthase-like 8 300 - -
Pvu1g1321 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 29 85 IPR026992 -
Pvu1g1321 319 Gene3D - 1 305 IPR027443 -
Pvu1g1321 319 Pfam 2OG-Fe(II) oxygenase superfamily 173 264 IPR044861 -
Pvu1g1321 319 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 314 - -
Pvu1g1321 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Pvu1g1321 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1321 Pvu-Chr1 35957411 35959393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1321 130 285 Glycosyltransferase AT5G59530 29.630 6.87e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1321 - - gmx:100775440 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1321 1 35957411 35959393 Pvu7g2558 7 48783784 48785936 PCT
Pvu7g2556 7 48770328 48773562 Pvu1g1321 1 35957411 35959393 PCT