Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1322 ATGGGGTTGGAAAGAGAGAATACAAAATCTCTACCTATTATTGATTTCAGTGATGAAAACCTAAAACTTGGTACTCAAACATGGATTTCCACTTCTGATGCTGTGAGGGGTGCCTTAGAGGATCACGGTGGATTCTTAGCACACTACAATAAGGTTGAACCACTGGTCAACGACTCTGTCTTCTCTGCAATGGAACAACTCTTTGACCTTCCATTAGAAACAAAAATGCAGCACACCACTGAAAAGCCTATCTATAGCTATGCAGGGCAACGCCGTGATATTCCTTTGTATGAATCCATGGCCATCGATAACCCATTGAATGCTAAAAGTTGTCACAAGTACACAACCACTATGTGGCCACAAGGGAATGATCAATTCAGTGAAATTGTGAATTCATATGGAAAGAAAGTTGCAGAACTGGATTATATTGTTAAGAGAATGGTGTTTGGGAGCTATGGATTGGAGAATGAGAAATGTGAGTGTTTGCTTGAATCAACAGATTATGTTCTGAGATGCTACAAATATAGAACACCTGAGGCTGGTGAGACCAACTTGGGAGTGCATCCTCATACAGATTCTGGTTTCCTTACAATATTGAATCAGAGGTTAAATGGCTTAGAAATTCAGTTGAAGAATGGAGAGTGGTTCCAGGTTGATGCCTCACCCTCCATCTTTGCTGTCTTGGCTGGTGATGCATTTATGGTATGGAGTAATGACAGGATACGCGGTTGTGTACACAGAGTATTAATGAATTCAAAGGTAGAGAGATACAGTTTGGGGCTGCTTTCATATGCTGGAAAGGTGATGGAACCAGAGGAAAAATTAGTGGATGAAGAACACCCTCTTCGTTATAAACCATTTGACCAATATGGATATCTTCGTTTCTTCCTCACAGAAGAAGCTGTAAAAGCTGCTTCTAGGATCAAGGCATATTGTGGTATTTGA 945 0.4063 MGLERENTKSLPIIDFSDENLKLGTQTWISTSDAVRGALEDHGGFLAHYNKVEPLVNDSVFSAMEQLFDLPLETKMQHTTEKPIYSYAGQRRDIPLYESMAIDNPLNAKSCHKYTTTMWPQGNDQFSEIVNSYGKKVAELDYIVKRMVFGSYGLENEKCECLLESTDYVLRCYKYRTPEAGETNLGVHPHTDSGFLTILNQRLNGLEIQLKNGEWFQVDASPSIFAVLAGDAFMVWSNDRIRGCVHRVLMNSKVERYSLGLLSYAGKVMEPEEKLVDEEHPLRYKPFDQYGYLRFFLTEEAVKAASRIKAYCGI* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1322 314 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 7 313 - -
Pvu1g1322 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 313 - -
Pvu1g1322 314 Pfam 2OG-Fe(II) oxygenase superfamily 178 259 IPR044861 -
Pvu1g1322 314 SUPERFAMILY Clavaminate synthase-like 7 299 - -
Pvu1g1322 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 270 IPR005123 -
Pvu1g1322 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 88 IPR026992 -
Pvu1g1322 314 Gene3D - 8 312 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1322 Pvu-Chr1 35969998 35971616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1322 133 285 Glycosyltransferase AT5G59530 28.125 5.04e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1322 - - gmx:100817683 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1322 1 35969998 35971616 Pvu7g2559 7 48787788 48790487 PCT
Pvu7g2558 7 48783784 48785936 Pvu1g1322 1 35969998 35971616 PCT