Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2300 ATGGAAGCGTTTGAAGGGGCGAGGGATGACATTTCATCCCAAGTGGGTCTGATTTGGAGCCAAGTGAAGGAGCCAGTGATGGTGCCACTGCTGAGAGTTGCAGTGTTTGTGTGCTTGGGCATGTCGATTATGATGTTGGTGGAGAGGGTGTACATGGGGTTTGTGATTTGCTTGGTGAAGCTGTTCGGTAGAAGACCCGAGAAGCGTTACAAGTGGGAGTCTCTGAAGGAGGACGTTGAGTTGGGAAACTCTAGTTATCCCATGGTCTTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAACTCTCAATCGGTGCTGCTTGTGGCCTTTCTTGGCCTTCAGACAGGATCATCGTACAAATTCTTGATGATTCTACTGACCCATCAATCAAGGAGTTGGTGCAAATGGAATGTAGCAGATGGGCAAGCAAAGGAGTGAACATAAAGTACGAAGTGAGGGACAACAGAAATGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAACGTAGCTACGTGAAGCAATGTGACTATGTGGCCATATTTGACGCGGATTTTCAACCAGAACCTGATTTCCTCTGGCGAACTGTCCCATTCCTAGTCAACAACCCTGAACTTGGTCTCGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACAAGAATGCAAGAGATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAATGGAACTGCGGGTGTATGGAGAATTTCGGCGCTGAATGAAGCTGGGGGGTGGAAGGATAGAACCACAGTGGAAGATATGGACCTGGCTGTCCGAGCCAGTCTTAAAGGATGGAAATTCTTATACCTCGCCAATTTGAAGGTTAAAAATGAATTACCAAGTACTCTGAAGGCCTACCGGTACCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCAGGAAAATGGTCATGGAGATAATAAGGAACAAGAAAGTATCCTTGTGGAAGAAGATATATGTGGTTTACAGCTTCTTCTTCGTCCGGAAGGTCGTGGCCCACTTAAACACTTTCGTGTTCTACTGCATTGTCTTACCTGCAACAGTTGTGGTGCCTGAGGTGGCGGTACCCAAGTGGGGTGCTGTTTATATCCCTTCCATCATCACACTCCTAAATGCTGTGGGAACTCCAAGGTCACTCCACTTACTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCTACAATTATTGGTCTACTAGAGGCTAGCCGAGTGAATGAATGGATTGTCACCGAAAAACTTGGAGATGCTCTTAAGGGTAAAGGTGGGGGTAAAGCAGCCAAGAAGATTCGTTTCAGGATTGGAGACAGAATTCACATGCTGGAACTTCTTGTTGGATTCTACCTTTTCTTCTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCGGTTCTATATATTCCTATATATTCAATCAATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTATCGTTCCCAACTCCTAA 1572 0.4574 MEAFEGARDDISSQVGLIWSQVKEPVMVPLLRVAVFVCLGMSIMMLVERVYMGFVICLVKLFGRRPEKRYKWESLKEDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIVQILDDSTDPSIKELVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVSLWKKIYVVYSFFFVRKVVAHLNTFVFYCIVLPATVVVPEVAVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKGGGKAAKKIRFRIGDRIHMLELLVGFYLFFCGCYDVMFGKNRFYIFLYIQSIAFFIMAFGYVGTIVPNS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2300 523 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 522 - -
Pvu7g2300 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 302 IPR029044 -
Pvu7g2300 523 PANTHER - 1 522 - -
Pvu7g2300 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 362 IPR029044 -
Pvu7g2300 523 Pfam Glycosyl transferase family group 2 180 379 IPR001173 -
Pvu7g2300 523 CDD CESA_CaSu_A2 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2300 Pvu-Chr7 46343343 46349901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2300 2 522 Miscellaneous Gene Families AT5G03760 78.352 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2300 K13680 - gmx:100782772 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2300 7 46343343 46349901 Pvu11g0923 11 8859147 8865349 ECH
Pvu7g2300 7 46343343 46349901 Pvu7g2300 7 46343343 46349901 ECH
Pvu1g1924 1 45082074 45087397 Pvu7g2300 7 46343343 46349901 PCT