Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0923 ATGGTTGATTCAGAGCCAAAGTTCTTCATCCCGGAGTCAATCCAGGGCGTGAATTTCGACGTGACGGCTCAGATGAGGATGGTGTGGGAAGTGATAAAGGCGCCGCTGATCGTGCCGCTGATGAACGTGGCGGTGTACATTTGCCTCGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTCAAACTCTTCTGGAAGAAACCCCACCAACGCTACAAGTTCGAACCCCTCCAAGAGGACGAGGAACTCGGCAACACCAACTTCCCCGTCGTCCTTATTCAGATTCCCATGTTCAATGAAAGAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGTAATCTCTCATGGCCTTCAGATCGTCTCGTGATCCAAGTGCTGGACGATTCAACTGACCCTACCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGGATAAACATAATATACCAAATCAGAGAGACTCGAGGGGGCTATAAAGCGGGTGCTCTTAAAGAAGGTCTAAAACGTAGCTATGTGAAACATTGCGAGTACGTGGCAATTTTCGATGCTGATTTTCGTCCAGAACCAGATTTTCTGAGACGTTCTATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTGGTTCAAGCTCGATGGAGATTTGTGAATTCTGATGAGTGTTTGCTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACTGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTGTTTGGAGAATAGGTGCTATTAATGAAGCTGGAGGGTGGAAAGACAGAACAACGGTGGAAGATATGGATCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCAAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGATGGTCTTGTGGTCCTGCTAACTTGTTCCGCAAAATGGTTATGGAGATAGTAAGGAACAAGAAAGTAAGGTTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTCGCAAAATCATAGCTCATATGGTCACCTTCTTCTTCTTCTGTGTTGTGATTCCAATCACAATCTTGATCCCTGAGGTTTACGTTCCAATATGGGGAGCTGTTTATATTCCTTCTGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCATCGTACCAAGGCAACATTTATAGGTCTGTTAGAGTATGGGAGGGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAACAGCAATACCAAGAATAAAACAGGAGATGCTGCCAAGAAGAATAATGTCAGCAAGGCCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTCCTGGAGCTGGGATTTGCTGCATTCCTCTTCTTCTGTGGATGCTATGATTTTGTGCATGGGAAACACAACTACTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTGGGATTTGGCTACGTTGGCACCATAGTGTAA 1629 0.4518 MVDSEPKFFIPESIQGVNFDVTAQMRMVWEVIKAPLIVPLMNVAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQEDEELGNTNFPVVLIQIPMFNEREVYKVSIGAACNLSWPSDRLVIQVLDDSTDPTIKQMVEMECQRWASKGINIIYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIGAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFFCVVIPITILIPEVYVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNSNTKNKTGDAAKKNNVSKAPKKTRSKFVERLNFLELGFAAFLFFCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0923 542 PANTHER BNAC09G36340D PROTEIN 5 542 - -
Pvu11g0923 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Pvu11g0923 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 380 IPR029044 -
Pvu11g0923 542 Pfam Glycosyl transferase family group 2 190 397 IPR001173 -
Pvu11g0923 542 CDD CESA_CaSu_A2 97 333 - -
Pvu11g0923 542 PANTHER - 5 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0923 Pvu-Chr11 8859147 8865349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0923 1 542 Miscellaneous Gene Families AT5G22740 80.443 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0923 K13680 - gmx:100791645 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0923 11 8859147 8865349 Pvu11g0923 11 8859147 8865349 ECH
Pvu1g1924 1 45082074 45087397 Pvu11g0923 11 8859147 8865349 ECH
Pvu7g2300 7 46343343 46349901 Pvu11g0923 11 8859147 8865349 ECH