Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2022 ATGTCCCACACACCACCGCAAACCCTCGATTCCGAGGAGCCATCCCCCGCCACCGCCGCCCAAACCCCCGACTCCCAAGCCGCCACGCTCCTCCACATCTCCTTCAACCAGGATTCCGGATGCTTCGCCGCGGCTACCGACCGCGGCTTCCGCATCTACAACTGCGACCCCTTCCGGGAGATCTTCCGCCGCGATTTCGGCCCTGGCGGCGGCGTTGGCCTTGTCCACATGCTCTTCCGCTGCAACATACTCGCTTTCGTCGGTGGCGGCGCTGACCCCCGGTACCCCCCCAACAAGGTTATGATTTGGGACGACCACCAGTCCCGCTGCATCGGTGAGCTTTCCTTCCGCTCCGAGGTGAAGGGCGTGCGTCTCCGGCGCGACCGCATCGTGGTGGTTCTGGCGCACAAGATCTTTGTGTACAACTTCTCCGATCTCAAGGTGCTGCACCAAATCGAGACCATCGCCAACCCTAAGGGCCTCTGCGACCTCTCCCACGTTTCCGCCACCATGGTCCTCGTCTGCCCCGGCTTGCAGAAGGGGCAGGTCAGGGTTGAGCACTACGCTTCCAAGAGGACCAAGTTCATCATGGCGCACGATTCCCGAATTGCGTGTTTTGCTCTCACGCATGATGGCAGGTTGCTCGCCACCGCCAGCTCCAAGGGCACCCTCATCAGGCTCTTCAATACCCTCGATGGTTCATTGCTGCAAGAGGTAAGGAGGGGTGCAGACCGGGCAGAGATATACAGCCTTGCATTCTCTCCTACTGCACAGTGGCTGGCTGTCTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTGAAGGTTGATTCTGGACTGATGGGGCATGACAGATCGCACAGTACTTCTTCTGAGGCTAATCCTGCTAGCCCTACTGCTGTTTCATCTCTTTCATTTATTAAAGGTGTGCTACCTAAGTATTTTAGCTCGGAGTGGTCTGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAGTATGTTGTTGCATTTGGCCATCAAAAGAATACAATTGTAATACTAGGCATGGATGGCAGCTTCTACCGATGTCAGTTTGATTCTGGGAACGGTGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGGCAGAAGAAACATTCTAG 1143 0.5547 MSHTPPQTLDSEEPSPATAAQTPDSQAATLLHISFNQDSGCFAAATDRGFRIYNCDPFREIFRRDFGPGGGVGLVHMLFRCNILAFVGGGADPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFSDLKVLHQIETIANPKGLCDLSHVSATMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLIRLFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLMGHDRSHSTSSEANPASPTAVSSLSFIKGVLPKYFSSEWSVAQFRLQEGLQYVVAFGHQKNTIVILGMDGSFYRCQFDSGNGGEMTQLEYYNFLKAEETF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2022 380 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 14 380 - -
Pvu7g2022 380 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 14 380 - -
Pvu7g2022 380 SMART WD40_4 189 229 IPR001680 GO:0005515
Pvu7g2022 380 SMART WD40_4 16 54 IPR001680 GO:0005515
Pvu7g2022 380 SMART WD40_4 232 273 IPR001680 GO:0005515
Pvu7g2022 380 Gene3D - 27 359 IPR015943 GO:0005515
Pvu7g2022 380 SUPERFAMILY WD40 repeat-like 29 275 IPR036322 GO:0005515
Pvu7g2022 380 Pfam WD domain, G-beta repeat 242 273 IPR001680 GO:0005515
Pvu7g2022 380 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2022 Pvu-Chr7 43626334 43629370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2022 K22991 - gmx:100787427 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2022 7 43626334 43629370 Pvu7g2022 7 43626334 43629370 ECH
Pvu1g2123 1 46989620 46992624 Pvu7g2022 7 43626334 43629370 ECH
Pvu1g1556 1 40328582 40332533 Pvu7g2022 7 43626334 43629370 PCT