Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1556 ATGTCAGTTGCACCAGTTGAGAGTATTCCCTCATTGAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACTTGTGCAACGTTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAATGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTATTGGTGGATTCCGAAAATTTTATGCAGACTGTTTCCCGATTATTGTTAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCTTGAGTACCCGGACAATTGGACCGAAGCTGAGTATTATGGAGACAAGAATGAATCGGAAAACATCTGCCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGGAAACCGGTCTGTTCCAAAGTTCTTTGGGGAATTCCAAATGCAAATAGCCATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACCTATGCAGATAGAGATGATAACAATGATGGATCTGTTCACCTTTCTGTATCTGATGGTCTGCCACAGATTACATCCATGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAGCTCCGCGAAGGGCTCCAGCTAAGTTGGATTATAGTAAATAGGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGTCCTCTTGGTGGCCAAAGACACTGGCCAACAGAAAGGGATTTTGTTATCCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATCCTCATTATGAAGTTTAGAGTGGTTCAAACCGAAGAAGATGGTGTCCAAACCCTCCTTAAATTAACCGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGCTTGCTTATACTTAAGGATGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTTGAGTCTTGTCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAATGAAAGTAGGTTGGATAGACTTTGTATTCTGAGTGGCATTGCGGCCTTTATGACATTCTGGTACTGCGTTTTATAA 1122 0.4162 MSVAPVESIPSLSSDLFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPIIVNKEVVEYQPNNYLEYPDNWTEAEYYGDKNESENICPSDFVSIIDIRFKGKPVCSKVLWGIPNANSHDGWFYNCPFRIDFLTYADRDDNNDGSVHLSVSDGLPQITSMERERKDGKLWRELREGLQLSWIIVNRKMKQAANLASWSPLGGQRHWPTERDFVIRFGSVLPAKDILPCQVVECILIMKFRVVQTEEDGVQTLLKLTELSMQLEDMEGAHVNGRNSLLILKDALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1556 373 Gene3D - 3 106 - -
Pvu1g1556 373 SUPERFAMILY F-box domain 6 79 IPR036047 GO:0005515
Pvu1g1556 373 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
Pvu1g1556 373 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1556 Pvu-Chr1 40328582 40332533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1556 - - gmx:100500689 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1556 1 40328582 40332533 Pvu1g1556 1 40328582 40332533 ECH
Pvu1g1556 1 40328582 40332533 Pvu7g2022 7 43626334 43629370 PCT