Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu7g1957 | ATGGGTTGCTTTTTTGGTTGTTTTGGTTCCTCCAAACACCCAAAGAACAAGCGCAAGGTTCTTAGAAATGGTTGTACCAATGGCAAGCAAGAGCAACCTAGTGTAACTTTGGTTCAGGATTGCCCCAAAAATGCCGTTAACCCTATACCGCAACTCCAGGAGAAAAGTGAGGAGCGATTAAGTGTAAGTAGCAGAAAGAAAGTGACATTTGATTCCAACTTGAAGACCTATGAACGTAGTTTGGTGAATGAAGTTGGAGAGAGCAAGAGTGAGGATGGTGGAAAGGAGGAAGCTTTGGTTCAATCAAAGTTATCTTCCTCTGAAGATAATAGTTGTGTGACTTCAACGGGGTCTTACCCACCCAACCATAGGTACCAGAATTGCCGGGACAGTGAGGATGAGGAGGAAGAGATTGATTATGGGGACAGTGATCTTGGTGATGAAGATGACGATGTCATCAGAGAAGAGTGCAAAGAATTGGGGAGGGACTTTGGAGAAGATGGCATGGTGGCAACTACTGCTGCTGATCATGTGTTTGTTGAAGAGGTTGACGTGAAGTCAATCGAGTCCAACCCCAGTGCTAGAGACAGAAGTGTTTATGTGCATCCTGTACTGAACCCAGTGGAGAATCTCACTCAGTGGAAAGTTGTCAAGGCTAATAAAACACCATTAAGACCTCAGAAAGAGAACGAGTTTGGGGGTGTCAAAGAATCACCTTTCAGCTTGAAATCAGAAAGTGACACACCAAAGAAGTTGAACCAGGAGATCCCTGTTGATGCCAGCCTGTCAAATTGGTTGGTCTCACCAGAAACTACACCTGTTAACAAGGCTAGCTCAGTGGCTTTATTTGCTGGTACCCCTGACAGGAGCACCCCACAAAGTCCATATTCTGTGTTCAGTCATGAAGATAGGCCAATTTTAGGTGCATTGACATTGGAAGAGATCAAACAATTTTCGGCTACTTCTTCTCCAAGGAAGTCACCCAGTAGGAGTCCAGATGAGATGCCTATTATTGGCACTGTTGGGACCTACTGGAATGTTGCAGGCTCTGCAGAAGGTTCTGGCTCAGTCTCTTCCTTCAAAGGAATTCCGAACTCAACAAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCACTCAACCCCTTTTGAGACAAGATTAGAGAAAGCTTTGAATAGAGGTGCTGCTTCTTATGTTCCTCGTGTATTTTAG | 1212 | 0.4464 | MGCFFGCFGSSKHPKNKRKVLRNGCTNGKQEQPSVTLVQDCPKNAVNPIPQLQEKSEERLSVSSRKKVTFDSNLKTYERSLVNEVGESKSEDGGKEEALVQSKLSSSEDNSCVTSTGSYPPNHRYQNCRDSEDEEEEIDYGDSDLGDEDDDVIREECKELGRDFGEDGMVATTAADHVFVEEVDVKSIESNPSARDRSVYVHPVLNPVENLTQWKVVKANKTPLRPQKENEFGGVKESPFSLKSESDTPKKLNQEIPVDASLSNWLVSPETTPVNKASSVALFAGTPDRSTPQSPYSVFSHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNVAGSAEGSGSVSSFKGIPNSTSKYREDKRVNWHSTPFETRLEKALNRGAASYVPRVF* | 404 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 79 | 151 | - | - | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 23 | 41 | - | - | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 82 | 98 | - | - | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 11 | 67 | - | - | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 132 | 151 | - | - | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 100 | 125 | - | - | |
| Pvu7g1957 | 403 | PANTHER | RRNA BIOGENESIS PROTEIN RRP36 | 1 | 395 | - | - | |
| Pvu7g1957 | 403 | PANTHER | ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT | 1 | 395 | IPR039300 | GO:0007142 | |
| Pvu7g1957 | 403 | MobiDBLite | consensus disorder prediction | 225 | 250 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu7g1957 | Pvu-Chr7 | 42665428 | 42667456 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu7g1957 | - | - | gmx:100793067 | 595.119 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu7g1957 | 7 | 42665428 | 42667456 | Pvu7g1957 | 7 | 42665428 | 42667456 | ECH | |
| Pvu7g1957 | 7 | 42665428 | 42667456 | Pvu6g1101 | 6 | 22106536 | 22108897 | ECH | |
| Pvu1g1696 | 1 | 42457932 | 42459961 | Pvu7g1957 | 7 | 42665428 | 42667456 | ECH | |
| Pvu1g1696 | 1 | 42457932 | 42459961 | Pvu7g1957 | 7 | 42665428 | 42667456 | PCT | |
| Pvu6g1101 | 6 | 22106536 | 22108897 | Pvu7g1957 | 7 | 42665428 | 42667456 | PCT |