Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1696 ATGGGTTGCTTTCTTCATTGCTTTGGTTCCTCCACAGGCACGAAGCCCAGGCGCAAGGCTCACCATCACCACCGAAATGCTAAAGACAGGTTAGAGCAACCAACGGTGTGTTCTGTGCAGGATTACTCCAAAATGGTGGTACAAGAAGTACAGGCTAAACCTTTGGAGAAGCTAAACGTGAGCCCCAAAAAGAAGGTGACTTTTGATGTCAATGTGAAAACGTACGAGCCAGATGAAGTTGTTGATTTCCAAACAGAGAAGAGTGAAGAAAAAAGACCTTTGGTTGAAAAGTTAAGCCAAACAAGGTCTTACTCTGAAGAAAGTTCGGTTACTTCAACCGGGTCTTACCCAACAAATCATAGGTACCACGATTGCACATGCAGTGATGATGAAGATGCAGCAATGGAGAATTGGGATAGTGATATCACTGATGAGGATGAGGATGATGGTGGTGATAGTGACATGGGAGAAGAGTATGATGAAATAGGGGAGGACTTTGAAGATGGAATAGTATACCCAAGGTCAAGAAATGATGATAATCAAGGGTTTGTTGGAGAGGTGGAAAGTCCAATGCCAGTGTATGATAAGGATGTGAAGTCAATTGGGTTGAACCCCAATGTTCGAGATAGGAGTGTGTATGTTCATTCTGTGTTGAACCCTGTGGAGAACCTAACTCAATGGAAAGCAGTTAAGGCTAAAAGAGCACAGCCATTAGTGTCTCAGAAGGAAAATTTGGTTTTGAATCAAGAGTCCCGAGCTGCATTTGGTGCTGCATCACCTAAGAAGTTGAACCGGGAAATCGCAGTTGATGCTAGCCTTTCAAATTGGTTGGCTTCTTCAGAAACTACACCTGTTAGCAAGGGTTTGTATGCGGGTACCCCAGAGAGGAGTAGCTCACATGGCTCAAATACTGTGGCGAGTCATGAAGATAGGCCTATTTTAGGTGCATTGACAGTTGAAGAGCTTAAACAGTTTTCAGCTTCTTGTTCACCAAGAGATGAGATGCCTGTCATAGGCAGTGTTGGTAGCTACTGGAATTGTGGGGGCTATGCTCAGGATTCTGGCTCAGCAAATCGAGTAGCTTCAAGAAGGGTACAATACAATTGA 1107 0.4408 MGCFLHCFGSSTGTKPRRKAHHHHRNAKDRLEQPTVCSVQDYSKMVVQEVQAKPLEKLNVSPKKKVTFDVNVKTYEPDEVVDFQTEKSEEKRPLVEKLSQTRSYSEESSVTSTGSYPTNHRYHDCTCSDDEDAAMENWDSDITDEDEDDGGDSDMGEEYDEIGEDFEDGIVYPRSRNDDNQGFVGEVESPMPVYDKDVKSIGLNPNVRDRSVYVHSVLNPVENLTQWKAVKAKRAQPLVSQKENLVLNQESRAAFGAASPKKLNREIAVDASLSNWLASSETTPVSKGLYAGTPERSSSHGSNTVASHEDRPILGALTVEELKQFSASCSPRDEMPVIGSVGSYWNCGGYAQDSGSANRVASRRVQYN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1696 368 MobiDBLite consensus disorder prediction 287 306 - -
Pvu1g1696 368 MobiDBLite consensus disorder prediction 98 115 - -
Pvu1g1696 368 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 357 IPR039300 GO:0007142
Pvu1g1696 368 MobiDBLite consensus disorder prediction 84 115 - -
Pvu1g1696 368 MobiDBLite consensus disorder prediction 287 310 - -
Pvu1g1696 368 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1696 Pvu-Chr1 42457932 42459961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1696 - - gmx:100808067 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1696 1 42457932 42459961 Pvu1g1696 1 42457932 42459961 ECH
Pvu1g1696 1 42457932 42459961 Pvu6g1101 6 22106536 22108897 ECH
Pvu1g1696 1 42457932 42459961 Pvu7g1957 7 42665428 42667456 ECH
Pvu1g1696 1 42457932 42459961 Pvu7g1957 7 42665428 42667456 PCT