Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1101 ATGACCTGCTTTCTATCATGTTTTCATACTTCCAAACGTCGCAACCAATTGCGTTCTAAGGATGCAACTCACACACAAACCCATGTGGGAGAAGGAGCTGTTGAACCTCTTGCACGGCAGAAGACTGCTGTTGAAGAGCTCATTGATTGCATAGCAGAATCAAAGATAAAAAATGAAGAGCAGTTAAGTACCAGTGTTGAAATCAAGGAGGAGCGGGAGAAGGCGTCAAGAGAAGGGGAAGAACCTCAGATAGATGAGAAGAAGGATGAGATCAGGCATGAAGGAGATGATGAGATCAGTGAAAGATTGCATCAGGAAGAGTCTTCGGAGTCACTGTTCTCTCTGTGCGTTTGTTCTAGAAAAAAAGTTTCAGATGCCGAAACAGTTGAGCCTGAAGTTAATAGTCCAATACAACTGGTATGCACAAGAGAGGTATCTCAAGCATTTGGGTCGCCGGTTCTGAGTCCAACTGAAAAATTTACCAGTGAAAATCCATCCAAGGAGAAGGAAGAAGAATATTCTGGCAAGGGACTAATGGAGAAGTTGGACTACAACGAAGGAGAAAAGGGGAAAGCGACTCACCCTGTCCTACAGTATAGGTATAGAAATTGCCCCGGTGACGAATACGATGAGGTTAATTTAGATGCAAGTGATTTGGATTCTATGCTTGAAGATGATGATCCTCACAGTGGGAAGAGAGAAAGGGGGGAAGAAAGCGCTGTTGTTAACCGAACATGGGTGCAAGAAGAGTCTTCGGAATCTTTGTTTTCTCTATCTGGCGATTCTAGAATACGAATTTCATCAGCTGAAGCAGAGAATGAAGTTGACAGTCTAGTGTCAGCCTACGCTACAAACCGCATCACACAAAAAGAAGCACAAGGAAGGATTCCAGATGTTTCCTCAGTGATGAATCCAATCAAGAATCTTAACAAAGGGAGGGCAGTCAAAGCAACAGAAGAGCATCCACTGAAGATGGATAAAGAAAACATCAACTTGGTAGTGCAAGATGCTAACATACCCGTTAGTCCAGAGCCTACTTTGAAGCTGTCAAATCCCAAGGCTAGGATGTTCAGTGACAACAAAAGAAGGCAAGAAATTGGGGTAGACACCAGCCTCTCGAGCTGGTTGGTTGAATCGGAAACCACGCCTGTTTCCATTAACAGTACCAGTTCTGTGGGAGAACAGACACCAAAAGGAAGAAGAGGTTCACCGTGGAGTCACGAGGATAGGCCAATTTTAGGAGCATTAACAGTTGAAGAGATCAGGAAGTATTCTTTATCTGCACCTTCAAGAAGGTTTAGAAGCCGGAGTCCGGACGAGACACCCATCATAGGTACTGTTGGAAGCTACTGGACTCACACAGAACAGAGCATGGATTTTCGATTCACAGGAAAGGATGTAACACCAAAGAGGAGTTCAACAGCATTACAGACCAGACTACTAGGAGCATTTGACGCTAGTGTATAA 1467 0.441 MTCFLSCFHTSKRRNQLRSKDATHTQTHVGEGAVEPLARQKTAVEELIDCIAESKIKNEEQLSTSVEIKEEREKASREGEEPQIDEKKDEIRHEGDDEISERLHQEESSESLFSLCVCSRKKVSDAETVEPEVNSPIQLVCTREVSQAFGSPVLSPTEKFTSENPSKEKEEEYSGKGLMEKLDYNEGEKGKATHPVLQYRYRNCPGDEYDEVNLDASDLDSMLEDDDPHSGKRERGEESAVVNRTWVQEESSESLFSLSGDSRIRISSAEAENEVDSLVSAYATNRITQKEAQGRIPDVSSVMNPIKNLNKGRAVKATEEHPLKMDKENINLVVQDANIPVSPEPTLKLSNPKARMFSDNKRRQEIGVDTSLSSWLVESETTPVSINSTSSVGEQTPKGRRGSPWSHEDRPILGALTVEEIRKYSLSAPSRRFRSRSPDETPIIGTVGSYWTHTEQSMDFRFTGKDVTPKRSSTALQTRLLGAFDASV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1101 488 MobiDBLite consensus disorder prediction 379 397 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 162 178 - -
Pvu6g1101 488 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 162 486 IPR039300 GO:0007142
Pvu6g1101 488 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 80 144 IPR039300 GO:0007142
Pvu6g1101 488 ProSiteProfiles Intein N-terminal splicing motif profile. 257 325 IPR006141 GO:0016539
Pvu6g1101 488 PANTHER - 162 486 - -
Pvu6g1101 488 PANTHER - 80 144 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 152 178 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 223 240 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 379 410 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 61 108 - -
Pvu6g1101 488 MobiDBLite consensus disorder prediction 211 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1101 Pvu-Chr6 22106536 22108897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1101 - - pvu:PHAVU_006G104900g 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1957 7 42665428 42667456 Pvu6g1101 6 22106536 22108897 ECH
Pvu1g1696 1 42457932 42459961 Pvu6g1101 6 22106536 22108897 ECH
Pvu6g1101 6 22106536 22108897 Pvu6g1101 6 22106536 22108897 ECH
Pvu6g1101 6 22106536 22108897 Pvu7g1957 7 42665428 42667456 PCT