Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0741 ATGTGGCCATTCAAAAAGAAGGGGGCTTCTGGGTTTTCATCATCATCCACTGCAGAGCAAGTCACTGAAGGTCTCGATGGAACTGGTCTCACTGCCATTGTTACAGGAGCATCCAGTGGTATTGGCACTGAGACTACACGTGTACTTGCTTTGCGAGGTGTCCATGTGATTATGGGTGTGAGAAATATGATTGCTGCTAAAGATGTCAAAGAAACAATACTTAAGGAGATTCCCTCTGCAAAAGTTGATACCTTGGAGTTAGATCTCAGTTCAATGGATTCTGTCAATAAATTTGCATCAGATTTCAAGTCTTCTGGTCTTCCATTGAACATCTTGATAAACAACGCAGGAATTATGGCATGCCCTTTCAAGCTCTCTGCGGACAAAATTGAACTACAGTTTGCCACAAATCACATAGGTCATTTTCTATTGACAAATCTTTTGTTGGACACCATGAAGAAAACTTCACGTGAAACTAAGAAAGAAGGAAGAATTGTTAATGTCTCTTCTGAAGCTCACCGATTTGCATATTCTGAAGGAATCCGTTTTGACAAAATTAATGATAAGCCAAGTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTTGCCAACATTTTACATGCAAATGAACTTGCAAAACGTCTCAAGGAAGATGGGGTGGAGATTTCTGCAAATTCTCTTCATCCTGGAACAATTACCACCAATCTTTTCCGTCATATGCCAGTGAACGGTATAGTTAGTGCTATTGGTAGACTCGTGTTTAAAAATGTCCAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAATTAGTGGCAATTATTTTTCGGACAGTAATGTGGCCAAACCAACCTCACAGGGTACTGATGCTGATTTGGCCAAGAAACTTTGGGATTTTAGCTTGAATTTGATCAAGTAA 939 0.4089 MWPFKKKGASGFSSSSTAEQVTEGLDGTGLTAIVTGASSGIGTETTRVLALRGVHVIMGVRNMIAAKDVKETILKEIPSAKVDTLELDLSSMDSVNKFASDFKSSGLPLNILINNAGIMACPFKLSADKIELQFATNHIGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFAYSEGIRFDKINDKPSYNNWRAYGQSKLANILHANELAKRLKEDGVEISANSLHPGTITTNLFRHMPVNGIVSAIGRLVFKNVQQGAATTCYVALHPQVKGISGNYFSDSNVAKPTSQGTDADLAKKLWDFSLNLIK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0741 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 IPR002347 -
Pvu7g0741 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 IPR002347 -
Pvu7g0741 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Pvu7g0741 312 PANTHER RETINOL DEHYDROGENASE 2 312 - -
Pvu7g0741 312 Gene3D - 22 312 - -
Pvu7g0741 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 288 IPR036291 -
Pvu7g0741 312 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 312 - -
Pvu7g0741 312 CDD retinol-DH_like_SDR_c_like 29 304 - -
Pvu7g0741 312 Pfam short chain dehydrogenase 31 177 IPR002347 -
Pvu7g0741 312 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Pvu7g0741 312 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Pvu7g0741 312 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Pvu7g0741 312 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Pvu7g0741 312 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0741 Pvu-Chr7 6621102 6626658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0741 31 290 Acyl Lipid Metabolism Gene Families AT1G62610 27.758 3.64e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0741 - - gmx:100796920 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0741 7 6621102 6626658 Pvu7g0741 7 6621102 6626658 ECH
Pvu4g1200 4 37132868 37139528 Pvu7g0741 7 6621102 6626658 PCT
Pvu7g0741 7 6621102 6626658 Pvu4g1201 4 37170973 37179184 PCT