Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0978 ATGGCTTCTATCCTCTACTTTCTAGTCTTCTCTCTTTCTTGCTCGTTTCTTTTCTTATTATCCGAGTCCAATTATGTTAGCAATCCAGCATACCTGCTTGTTCTACCTACTCAAAAAGATGTTTCCACTGGTCTCCATTGGACCACCCTTCTCAAAAGGACCCCTCTGATACAAGTACCCGTCCTGGTGGACCTCAATGGAAACCAGTTGTGGCTCAACTGTGAGCAACATTACACATCCAAAACCTACGAAGCACCCTTCTGTCACTCTGCACAGTGCTTCAGAGCCAACACACATCAATGCCTCAGTTGCCCTGCAGCAGCAAGGCCAGGGTGCCACAAAAACACATGTGGTCTCATGTCCACCAACCCTGTCACCCAACAAAACGGTTTGGGTGAACTAGGCCAAGATGTGCTTGCAATCCACGTCTCTCTAGGAACCCAACTTGGTGAGTTGTTCACAGTCCCTCACTTCCTCTTTTCTTGTGCACCTTCCTTCCTTCTCCAAAAGGGTCTTCCAATGAATGTTGAAGGAGTAGCTGGCTTAGGCCATGGACCTATTTCTCTTCCAAACCAACTTGCTTCCCACTTTGGTCTGCAACGCCAATTCACCACCTGTCTCTCTCGCCACTCATCATCTTCAAAGGGCGCTATCATCTTTGGAGATGCACCAAACAATTTGCATGAACTTCACGGCCACGCTATTTTCCAAGATCTGGCTTACACCCCATTAACCATCACCCCACAAGGAGAGTACAACGTGAGAGTGAACTCCATAAGAATCAACCAGCACAGCGTGACCCCAGTTAAAAAGACATCATCAACCATAGTAGGACATTCGGGAGGAACCATGATTAGCACGTCAACTCCTCACATGGTTCTGCAGCAATCTCTTTACGAGTCTTTCATTCAAGTGTTTGCTCAACAGCTTCCAACGCAAGCTCATCAAGTGAAAGCTGTGGCACCATTTCAGCTGTGTTTTCATTCCAAAAACACCAGTGAATATCCTGGCGTGGAGCTTGTGATGGACAAGCCTAATGGTCCGGTTTGGAGAATCTCTGGTGAGGCCTTGACTGTGCAGACACAACCCGGAGTGTGGTGTTTGGCCGTGGTGAACGGTGGAATGCAACCTAGAGCTGAAATCACCATAGGAGCAAGGCAATTGGAAGAGAATCTGGTGGTGTTCGACCTTGCAAAATCAAGGGTTGGCTTTGGCACTTCTCCACTGGCCTCGCATGGGATGAAATGTGCAGATCTCTTCAACTTTGTTGATGCTTGA 1278 0.4773 MASILYFLVFSLSCSFLFLLSESNYVSNPAYLLVLPTQKDVSTGLHWTTLLKRTPLIQVPVLVDLNGNQLWLNCEQHYTSKTYEAPFCHSAQCFRANTHQCLSCPAAARPGCHKNTCGLMSTNPVTQQNGLGELGQDVLAIHVSLGTQLGELFTVPHFLFSCAPSFLLQKGLPMNVEGVAGLGHGPISLPNQLASHFGLQRQFTTCLSRHSSSSKGAIIFGDAPNNLHELHGHAIFQDLAYTPLTITPQGEYNVRVNSIRINQHSVTPVKKTSSTIVGHSGGTMISTSTPHMVLQQSLYESFIQVFAQQLPTQAHQVKAVAPFQLCFHSKNTSEYPGVELVMDKPNGPVWRISGEALTVQTQPGVWCLAVVNGGMQPRAEITIGARQLEENLVVFDLAKSRVGFGTSPLASHGMKCADLFNFVDA* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0978 425 ProSiteProfiles Peptidase family A1 domain profile. 46 405 IPR033121 -
Pvu6g0978 425 SUPERFAMILY Acid proteases 38 408 IPR021109 -
Pvu6g0978 425 CDD xylanase_inhibitor_I_like 52 408 IPR033868 -
Pvu6g0978 425 Gene3D Acid Proteases 223 425 IPR021109 -
Pvu6g0978 425 Pfam Xylanase inhibitor C-terminal 251 405 IPR032799 -
Pvu6g0978 425 Pfam Xylanase inhibitor N-terminal 49 222 IPR032861 -
Pvu6g0978 425 Gene3D Acid Proteases 26 222 IPR021109 -
Pvu6g0978 425 PANTHER BASIC 7S GLOBULIN 8 422 - -
Pvu6g0978 425 PANTHER ASPARTYL PROTEASE-RELATED 8 422 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0978 Pvu-Chr6 21151848 21153399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0978 - - gmx:547908 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1552 1 40291563 40293172 Pvu6g0978 6 21151848 21153399 ECH
Pvu3g0959 3 18640833 18642083 Pvu6g0978 6 21151848 21153399 ECH
Pvu6g0978 6 21151848 21153399 Pvu6g0978 6 21151848 21153399 ECH