Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0959 ATGGCTTCTCTTCTTCTCATCATCATCATCTCCTTCCTCACTCTCCAACTCTCACTCTCCACCGCTCACTCCCCAGTTTCCTTCACAATCCCTGTCACCAAAGACGCTGCTACCCTCCAATACCTAACCACCCTCTCCTACGGTACTCCTCTTGTTCCCACCAAACTCGTCCTTGATTTGGGAGGTTCTTTCCTCTGGCTCCACTGTGCCTCCCGAAACACCCCTTCGTCTTCTTCCCTCACCACCCCTCACCGCTCCCTCCAATGCCTCACAGCCAAAACCCACAAATCTACCAACTCCTTTCTCTCCGGCCCCGTCGACCAACACCACTACCAACCCTGCCAAGTCTTTCCGGAGAACAGCATCACCGGAACAATCGCCTCCGAGGGAGAACTGGTGGAGGACCTCATGGCCCTTCAATCTGCGGAATCCAAAACCATCCACGAGCACCAGAGTCGCTTCACGTGTTCCCCCACCTCCCTCTTGCATGGGCTCGCCAAGGGTGCCAGAGGCATGGTTGGCCTCGCTAGGTCCCGCAGTTCGTTTCCCTCCCAGGTTTTCGACAACTTCAGCACGCAGCGGAAACTCACTCTCTGCCTCTCCTCCTCCAAAGGGGTTCTCCTCTTGGGCAACGTCGCTTACGAATCCGAGATTCTCAAGTCTCTAACCTTCACGCCCCTCGTCACCAGTTTCCCCTCCCAGGAATACTTCATCAACGTCAACTCCGTTAAAATCAACGGAAAAAGGTTGTCCTTGGACGTCTCAGAGTTCAACGAGCAAGAGGGTGGGGGAGGAGGGGCTTTGACTCTTATAAGCTCAATTGTGCCCTACACCACCATGCAGAGTTCCATCTACAATTCTTTCAAGGAAGCGTTTTTGGACGCTGCCGTGTCCATGAACATGACAAGAGTGGCCTCCGTGGCACCCTTTGAGCTCTGTTTCAGTTCCTCGCAAGTGGGGCCCTCTGTGCCGGTTATTGAACTGGTTCTGCAGAGTGAGATGGTGAAGTGGAGCATTCATGGGAGGAACTCCATGGTGAGAGTGAGCGATGAGGTGGCGTGTTTAGGGTTCTCGGATGGAGGTGTGAACCTGAGAAATTCAATTGTCATTGGAGGGTATCAATTGGAGGATGTGATAGTGCAGTTTGACTTGGCCACTTCCATGGTGGGATTTAGTTCTTCTCTTCTCACCAAAAAAACCAAGTGTTCCGATTTTAAGTTCGGTAGTTCTGTTCCTGCAGAGTCCATCTGA 1251 0.5268 MASLLLIIIISFLTLQLSLSTAHSPVSFTIPVTKDAATLQYLTTLSYGTPLVPTKLVLDLGGSFLWLHCASRNTPSSSSLTTPHRSLQCLTAKTHKSTNSFLSGPVDQHHYQPCQVFPENSITGTIASEGELVEDLMALQSAESKTIHEHQSRFTCSPTSLLHGLAKGARGMVGLARSRSSFPSQVFDNFSTQRKLTLCLSSSKGVLLLGNVAYESEILKSLTFTPLVTSFPSQEYFINVNSVKINGKRLSLDVSEFNEQEGGGGGALTLISSIVPYTTMQSSIYNSFKEAFLDAAVSMNMTRVASVAPFELCFSSSQVGPSVPVIELVLQSEMVKWSIHGRNSMVRVSDEVACLGFSDGGVNLRNSIVIGGYQLEDVIVQFDLATSMVGFSSSLLTKKTKCSDFKFGSSVPAESI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0959 416 ProSiteProfiles Peptidase family A1 domain profile. 41 392 IPR033121 -
Pvu3g0959 416 PANTHER ASPARTYL PROTEASE-RELATED 9 405 IPR001461 GO:0004190|GO:0006508
Pvu3g0959 416 Gene3D Acid Proteases 25 210 IPR021109 -
Pvu3g0959 416 PANTHER BASIC 7S GLOBULIN 2 SMALL SUBUNIT 9 405 - -
Pvu3g0959 416 SUPERFAMILY Acid proteases 32 400 IPR021109 -
Pvu3g0959 416 Pfam Xylanase inhibitor N-terminal 41 211 IPR032861 -
Pvu3g0959 416 Pfam Xylanase inhibitor C-terminal 235 392 IPR032799 -
Pvu3g0959 416 Gene3D Acid Proteases 211 410 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0959 Pvu-Chr3 18640833 18642083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0959 16 401 Miscellaneous Gene Families AT1G77480 20.147 3.50e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0959 - - gmx:100806719 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0959 3 18640833 18642083 Pvu6g0978 6 21151848 21153399 ECH
Pvu3g0959 3 18640833 18642083 Pvu3g0959 3 18640833 18642083 ECH
Pvu3g0959 3 18640833 18642083 Pvu6g1591 6 26588944 26590495 PCT