Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1836 ATGTGTTCTAAATACCTGTACATTATCCTCAAAAAACCTTGTTTTTCTGGAAAAGGTGAAGAAGAAGAAACACAACAGAACCCAAAAAAACAACTTCCTTACAGAACGAAGCCTCACCATTCCAGGACTGCCACCAAGCACAGTGGTTGTCTTGGACCCTTTAAAAAGCCCCCTCTAATTGCTAATGTTGATGTTCCACCGAAAGGATTGAAGAAGCGAGGTAAGGCAGCAAAGATACCTAGCACATCAGAGGATTTCTGGATCACCAGCACACATGATATGGACAACAGTGCTGTTCAGTCACAGGGAAGCATCTCATCAGCCAGTATAACCAATCAAGCAGCAGATCCTCATGGAGGTTCATGCAACCCCACTGAATTTGTGAATCATGGTCTTACCCTTTGGAATCAGAACCGGCAAGCTTGGATCGGAAGTAAGAGGTCCGAGAACCGAACCGAAAAGTCACGAGAATCAAAAGTGAGTTGGAATGCAACATATGAAAGTTTATTGGGTGGCAACAAGCCATTCCCTCAGCATATTCCCCTCGCGGAAATGGTAGATTTCCTTGTGGACATCTGGGAACAAGAGGGTCTCTATGACTAA 603 0.4444 MCSKYLYIILKKPCFSGKGEEEETQQNPKKQLPYRTKPHHSRTATKHSGCLGPFKKPPLIANVDVPPKGLKKRGKAAKIPSTSEDFWITSTHDMDNSAVQSQGSISSASITNQAADPHGGSCNPTEFVNHGLTLWNQNRQAWIGSKRSENRTEKSRESKVSWNATYESLLGGNKPFPQHIPLAEMVDFLVDIWEQEGLYD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1836 200 MobiDBLite consensus disorder prediction 17 51 - -
Pvu5g1836 200 MobiDBLite consensus disorder prediction 97 119 - -
Pvu5g1836 200 PANTHER OS07G0479600 PROTEIN 41 200 - -
Pvu5g1836 200 MobiDBLite consensus disorder prediction 97 125 - -
Pvu5g1836 200 PANTHER DUF4050 FAMILY PROTEIN 41 200 - -
Pvu5g1836 200 Pfam Protein of unknown function (DUF4050) 90 158 IPR025124 -
Pvu5g1836 200 Pfam Protein of unknown function (DUF4050) 160 200 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1836 Pvu-Chr5 40038345 40041620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1836 - - pvu:PHAVU_005G177600g 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1610 10 42423170 42425728 Pvu5g1836 5 40038345 40041620 ECH
Pvu3g1713 3 37379792 37383129 Pvu5g1836 5 40038345 40041620 ECH
Pvu5g1836 5 40038345 40041620 Pvu5g1836 5 40038345 40041620 ECH
Pvu5g1836 5 40038345 40041620 Pvu10g1610 10 42423170 42425728 PCT